Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01828 ATGTACCATCATCACCGACACCAAGGAAAAAACATTCATTCTACTTCCAGAATGCCAATCCCCTCTGAGAGACACATGTTCCTTCAAACAGGAAATGGGTCTGGAGATTCTGGACTTGTGCTTTCAACTGATGCTAAGCCAAGATTAAAATGGACACCAGATCTTCATGCCAGATTCATAGAAGCAGTAAATCAGTTAGGGGGAGCTGACAAAGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTTCAGGGCTTACCTTATATCATTTAAAGAGCCATCTTCAGAAGTATAGATTGAGCAAGAATCTGCATGGACAAAGCAACAACGCGACACAAAAAATGACAACAAGTGCAACAACTGGGGAGAGACTTTCTGAAACCAGTGGAACTCACATGAGCAAATTAAGCCTTGGACCGCAGGCTAACAATCATGCTAATTTTCAATGCCTTCTATCCAAAGATTTGCATATAGGCGAGGCACTGCAAATGCAGATTGAGGTGCAGAGAAGGCTCAATGAACAACTTGAGGTACAAAGACACCTGCAGCTTAGGATAGAGGCCCAGGGAAAATACCTTCAGTCTGTGTTGGAGAAAGCTCAGGAGACTCTTGGCAGACAGAATTTGGGAATAATAGGACTTGAAACTGCCAAAGTTCAACTATCAGAGCTGGTGTCCAAAGTCTCATCTCAGTGCCTTAACTCAGCATTCTCAGAGCTGAAGGAATTGCAAGGATTTTGCCCTCAGCAAACACATACCAACCAGCCAAACGATTGCTCAATGGACAGTTGCCTCACATCCTGTGACATATTACAAAAGGAGCAAGAGATTCAAAATAGCCTAAGACACTTCAACAGCCATGTGTTCATGGAACAAAAGGAAAGTACAGATGCTCGCAATAATCTTAGGAACTCTGAACTGAAGTGGTGTGATGATGGAAAAAAGAACACTTTCCTTGCCCCATTGAGCGAAAATGAAGAAAGAAGAAAGTATGCCGCTGAAACTGGTCCTGGCAACTTATCCATGTCCATTGGACTTGAAAGAGAAACAGAAAATAGAAGCAGCATGTATCCTGAAAGCCTGATCAAAGAAAGCCAATCAGAAGGTGAGTTCCAGCACCGCAACAGAATCAAGACAGAAACAATGAAAGCAGTGGATGAAAAAGTTTGTCAAGATTATAGAATGCCAGCTTCTTGCTTTGTAGCAACACGATTGGACCTAAACAACCATGGAGACAATGAAGCTGCAACCACTTGTAAACAACTGGACTTGAATAGATTCAGTTGGAGCTAA 1293 0.4238 MYHHHRHQGKNIHSTSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKNLHGQSNNATQKMTTSATTGERLSETSGTHMSKLSLGPQANNHANFQCLLSKDLHIGEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGIIGLETAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQQTHTNQPNDCSMDSCLTSCDILQKEQEIQNSLRHFNSHVFMEQKESTDARNNLRNSELKWCDDGKKNTFLAPLSENEERRKYAAETGPGNLSMSIGLERETENRSSMYPESLIKESQSEGEFQHRNRIKTETMKAVDEKVCQDYRMPASCFVATRLDLNNHGDNEAATTCKQLDLNRFSWS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01828 430 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Phac5g01828 430 MobiDBLite consensus disorder prediction 1 21 - -
Phac5g01828 430 FunFam Myb family transcription factor 45 103 - -
Phac5g01828 430 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Phac5g01828 430 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Phac5g01828 430 Gene3D - 45 103 - -
Phac5g01828 430 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 345 IPR044848 GO:0003700
Phac5g01828 430 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Phac5g01828 430 Pfam MYB-CC type transfactor, LHEQLE motif 157 203 IPR025756 -
Phac5g01828 430 MobiDBLite consensus disorder prediction 105 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01828 Phac-Chr5 38396028 38399495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01828 78 430 G2-like Transcription Factor Family AT3G04030 47.899 3.09e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac5g01828 Myb_DNA-binding 3.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01828 - - pvu:PHAVU_005G123900g 850.506