Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01810 ATGGAAGATCTCCCACCTGGTTTTCGATTCTACCCGACAGAGGAAGAGCTTGTTGCCTTCTATCTGCACAACCAGCTCCAGGGACAAATACACGACACAAGCACGGTTATTCCAGTCATTGACATCAATGGCGTAGAGCCTTGGAACCTTCCAACCCTTGCAGGGGAGCGTTGTCGTGGAGACACGGAGCAATGGTTCTTCTTTTCCCCGAGACAAGAGAGAGAGACGAGAGGAGGTAGACCCAACAGAACCACCGCAAGTGGGTACTGGAAAGCCACTGGTTCTCCTTGCCACGTTTACTCTTCTGACAACAAAGTCATTGGGATGAAGAAAACCATGGTGTTTTACAAAGGGAAGGCTCCAACTGGAAGGAAAACCAAATGGAAGATGCATGAGTACAAAGCCATTCAACACTCTCATCAATCCAACACAACCTCTCCCAAGTTGAGGCACGAGTTCAGCTTGTGTCGTGTTTATGTTATATCGGGAAACTTTAGATCGTTTGATCGACGACCTCTAGAGATGGCAAGAGCTGAGTTAGGAGTTGATGAGAATAGAGGTGCTGCTTCAACAAGTGGTCAACAGAGAGCAGCGGTGGTGGATGGATCAAGTTCTTCTGATACTTCCCACTCTGGTGATGCTCATATTCATGAAGCTGGAGCAGGGTCAAGTGGCATACATTTGAATACAAGCAATAGGGTTGAGGAACCATTTTGGGAATGGGAAGAGTTGATTGAACATGACCCTTATCTCAAGCGTGCTTAA 765 0.4719 MEDLPPGFRFYPTEEELVAFYLHNQLQGQIHDTSTVIPVIDINGVEPWNLPTLAGERCRGDTEQWFFFSPRQERETRGGRPNRTTASGYWKATGSPCHVYSSDNKVIGMKKTMVFYKGKAPTGRKTKWKMHEYKAIQHSHQSNTTSPKLRHEFSLCRVYVISGNFRSFDRRPLEMARAELGVDENRGAASTSGQQRAAVVDGSSSSDTSHSGDAHIHEAGAGSSGIHLNTSNRVEEPFWEWEELIEHDPYLKRA* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01810 254 MobiDBLite consensus disorder prediction 185 229 - -
Phac5g01810 254 MobiDBLite consensus disorder prediction 187 210 - -
Phac5g01810 254 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 188 - -
Phac5g01810 254 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Phac5g01810 254 Gene3D NAC domain 13 164 IPR036093 GO:0003677|GO:0006355
Phac5g01810 254 ProSiteProfiles NAC domain profile. 4 161 IPR003441 GO:0003677|GO:0006355
Phac5g01810 254 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01810 Phac-Chr5 38280241 38281342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01810 2 244 NAC Transcription Factor Family AT3G44350 56.098 5.74e-91 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac5g01810 NAM 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01810 - - gmx:100784960 421.009