Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01809 ATGGAAGATCTCCCACCTGGTTTTCGATTCTACCCGACAGAGGAAGAGCTTGTTGCCTTCTATCTGCACAACCAGCTCCAGGGACAAATACACGACACAAGCACGGTTATTCCAGTCATTGACATCAATGGCGTAGAGCCTTGGAACCTTCCAAGGGAGCGTTGTCGTGGAGACACGGAGCAATGGTTCTTCTTTTCCCCGAGACAAGAGAGAGAGACGAGAGGAGGTAGACCCAACAGAACCACCGCAAGTGGGTACTGGAAAGCCACTGGTTCTCCTTGCCACGTTTACTCTTCTGACAACAAAGTCATTGGGATGAAGAAAACCATGGTGTTTTACAAAGGGAAGGCTCCAACTGGAAGGAAAACCAAATGGAAGATGCATGAGTACAAAGCCATTCAACACTCTCATCAATCCAACACAACCTCTCCCAAGTTGAGGCACGAGTTCAGCTTGTGTCGTGTTTATGTTATATCGGGAAACTTTAGATCGTTTGATCGACGACCTCTAGAGATGGCAAGAGCTGAGTTAGGAGTTGATGAGAATAGAGGTGCTGCTTCAACAAGTGGTCAACAGAGAGCAGCGGTGGTGGATGGATCAAGTTCTTCTGATACTTCCCACTCTGGTGATGCTCATATTCATGAAGCTGGAGCAGGGTCAAGTGGCATACATTTGAATACAAGCAATAGGGTTGAGGAACCATTTTGGGAATGGGAAGAGTTGATTGAACATGACCCTTATCTCAAGCGTGCTTAA 756 0.4696 MEDLPPGFRFYPTEEELVAFYLHNQLQGQIHDTSTVIPVIDINGVEPWNLPRERCRGDTEQWFFFSPRQERETRGGRPNRTTASGYWKATGSPCHVYSSDNKVIGMKKTMVFYKGKAPTGRKTKWKMHEYKAIQHSHQSNTTSPKLRHEFSLCRVYVISGNFRSFDRRPLEMARAELGVDENRGAASTSGQQRAAVVDGSSSSDTSHSGDAHIHEAGAGSSGIHLNTSNRVEEPFWEWEELIEHDPYLKRA* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01809 251 ProSiteProfiles NAC domain profile. 4 158 IPR003441 GO:0003677|GO:0006355
Phac5g01809 251 Gene3D NAC domain 13 161 IPR036093 GO:0003677|GO:0006355
Phac5g01809 251 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 185 - -
Phac5g01809 251 Pfam No apical meristem (NAM) protein 5 131 IPR003441 GO:0003677|GO:0006355
Phac5g01809 251 MobiDBLite consensus disorder prediction 182 226 - -
Phac5g01809 251 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Phac5g01809 251 MobiDBLite consensus disorder prediction 184 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01809 Phac-Chr5 38280241 38281342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01809 2 241 NAC Transcription Factor Family AT3G44350 54.878 1.49e-86 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac5g01809 NAM 3.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01809 - - gmx:100784960 407.912