Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01801 ATGGAAGGGGTTTCCAGGGAAGCCCACATGTCAATCGCAGCTTCTTCCATGTTTCCTGGCTTCAGATTCTGCCCCACCGATGAGGAGTTGATTTCTTATTACCTTAGGAAGAAGTTGGACGGCCATGAAGAGAGTGTTCAAGTCATTTCTGAGGTTGAGCTCTGTAAATACGAGCCTTGGGATTTACCAGCCAAATCGTTCATTCAATCAGATAATGAATGGTTCTTCTTCTCTCCCCGTGGAAGAAAGTACCCAAATGGTTCACAAAGTAAAAGGGCAACTGAATGTGGATATTGGAAGGCCACCGGAAAAGAGCGTAATGTAAAGTCAGGTTCTAACTTTATAGGAACAAAGAGGACTCTGGTGTTTCACTTGGGGCGTGCACCTAAGGGGGAGAGGACTGAATGGATTATGCACGAGTACTGCATCAATGACAAGTCTCAGGATTCTTTGGTCATTTGTCGGCTGAAGAGGAACACAGAATTCCGTTTGAGCGATCATTCGAACAGAGCTTCTTCAAGTCAAAGGCATCCCGTGAATTCACACGAAAGTGGTTGTGCCATCTCAGAAGGTGGTGGTATAGATCAAAGGGATGTTTGTGAGCAGGACAAAGAGGTAGGATGTAGCTCCAAGAGGAGCAGTAGCAGTTACGGTTCTCCTTCGAATGAGCAAATTGATTCTGTCTCGGAATCGAATCATCGACCAGTTAATGAAGCTACATTGACAGCATCTTCAGATCAACCAAAGGAGGTGTATGAAGAGGATTGTTATGCTGAGATACTAAAGGATGATATCATAAAATTAGACGAATCATCAATCTCAGCAGAGGGTCACACACGAGCAGAGGAACCTGCACAAATGAATCCTGCACAAGGCACAGCACAGAGGAGAATAAGATTAAGAGTTAGGAATTCAAAGCGTTCTTCTCCTGCAGTAGTCGGTTTCCCAAGCACAGTAATGCAGTCGTCAAGGAGTAGCTTCTTCTTCGGAATAACAAACAGTTTGGTGGCACTTGTTTTCTTGGTTTTCACTTTGATATTTTTGGTGTTTGTTGGGTGGAGTGAAACAAGTGATTTGTTAATGGGGTGTAATTTATGA 1098 0.4381 MEGVSREAHMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVQVISEVELCKYEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNFIGTKRTLVFHLGRAPKGERTEWIMHEYCINDKSQDSLVICRLKRNTEFRLSDHSNRASSSQRHPVNSHESGCAISEGGGIDQRDVCEQDKEVGCSSKRSSSSYGSPSNEQIDSVSESNHRPVNEATLTASSDQPKEVYEEDCYAEILKDDIIKLDESSISAEGHTRAEEPAQMNPAQGTAQRRIRLRVRNSKRSSPAVVGFPSTVMQSSRSSFFFGITNSLVALVFLVFTLIFLVFVGWSETSDLLMGCNL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01801 365 MobiDBLite consensus disorder prediction 165 235 - -
Phac5g01801 365 MobiDBLite consensus disorder prediction 166 182 - -
Phac5g01801 365 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 229 - -
Phac5g01801 365 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Phac5g01801 365 MobiDBLite consensus disorder prediction 209 235 - -
Phac5g01801 365 Gene3D NAC domain 26 179 IPR036093 GO:0003677|GO:0006355
Phac5g01801 365 MobiDBLite consensus disorder prediction 275 295 - -
Phac5g01801 365 ProSiteProfiles NAC domain profile. 17 159 IPR003441 GO:0003677|GO:0006355
Phac5g01801 365 SUPERFAMILY NAC domain 8 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01801 Phac-Chr5 38215127 38218067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01801 4 286 NAC Transcription Factor Family AT2G27300 52.297 7.70e-96 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac5g01801 NAM 1.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01801 - - cam:101495489 508.064