Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01790 ATGCATTTTCAGTTTATAGTGTGTAGCTCTTATTCATCTCTGTGTTGTCACGGTTCATTTGATGCATTTATTGATAAATGCTACAGTTTTTCAATATACCCTGTAATTTCAGAAAATACTGTAAAGAGATCTCAAATTTTGATCCAGAAGTATAAGAGAAAAAGGTTTATGAGAGCCCTATTCAACACAAATGGATGTTGTGGATGTAGCAACCCTAAATCCTATGATGTACTCAAACTCTCCCCAAAACTTAAGATCTCAGTCTACCAAAACACAAACCCTACCATGTCCGGCGACAACCAACCCTTCTCCCAACTCCACACAAACCATCAAAACCCTAACAACAACAACATCATGTCAAAACCAAATTCAAAACTCATTCATAGTGTGGCCGTTGAGAAGGAATCAAACGACCCGCACAAGGATTTTCGAGACTCCATACTCCAAATGATCTTCCAGAGACAAATCTACACCAAAATCGATCTTCAAGACCTTCTCGAGTGCTTCCTCCAGTTGAACGCTGCCTGTCATCACCAAGTTATCGTTCGAGCATTCATGGAGATTTGTCAAGAAATCTTCCCCAAGAAGAATATCAACGCTGACGGCAACGGTGCTTCTTTCAATAACAAAATTTGA 636 0.3947 MHFQFIVCSSYSSLCCHGSFDAFIDKCYSFSIYPVISENTVKRSQILIQKYKRKRFMRALFNTNGCCGCSNPKSYDVLKLSPKLKISVYQNTNPTMSGDNQPFSQLHTNHQNPNNNNIMSKPNSKLIHSVAVEKESNDPHKDFRDSILQMIFQRQIYTKIDLQDLLECFLQLNAACHHQVIVRAFMEICQEIFPKKNINADGNGASFNNKI* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01790 211 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 105 193 IPR038933 GO:0045892
Phac5g01790 211 Pfam Transcriptional repressor, ovate 136 193 IPR006458 -
Phac5g01790 211 ProSiteProfiles OVATE domain profile. 132 191 IPR006458 -
Phac5g01790 211 NCBIfam uncharacterized plant-specific domain TIGR01568 130 191 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01790 Phac-Chr5 38030060 38032778 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phac5g01790 Ovate 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01790 - - pvu:PHAVU_005G121000g 276.944