Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01789 ATGTCCGGCGACAACCAACCCTTCTCCCAACTCTACACAAACCATCAAAACCCTAACAACAACAACATCATGTCAAAACCAAATTCAAAACTCATTCACAGTGTGACCGTTGAGAAGGACTCAAACGATCCGCACAAGGACTTTCGAGACTCCATACTCCAAATGATCTTCCAGAGACAAATCTACACCAAAATCGATCTTCAAGACCTTCTCGAGTGCTTCCTCCAGTTGAACGCTGCCTGTCATCACCAAGTTATCGTTCGAGCATTCATGGAGATTTGTCAAGAAATCTTCCCCAAGAAGAATATCAACGCTGACGGCAACGGTGCTTCTTTCAATAAAAAAATTTGA 351 0.4302 MSGDNQPFSQLYTNHQNPNNNNIMSKPNSKLIHSVTVEKDSNDPHKDFRDSILQMIFQRQIYTKIDLQDLLECFLQLNAACHHQVIVRAFMEICQEIFPKKNINADGNGASFNKKI* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01789 116 MobiDBLite consensus disorder prediction 1 29 - -
Phac5g01789 116 ProSiteProfiles OVATE domain profile. 37 96 IPR006458 -
Phac5g01789 116 Pfam Transcriptional repressor, ovate 41 98 IPR006458 -
Phac5g01789 116 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 23 98 IPR038933 GO:0045892
Phac5g01789 116 NCBIfam uncharacterized plant-specific domain TIGR01568 35 96 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01789 Phac-Chr5 38029690 38030171 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phac5g01789 Ovate 4.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01789 - - pvu:PHAVU_005G121000g 200.29