Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01787 ATGTCTTCCAAGAAGAGAAAAAGGTTTATGAGAGCCCTATTCAACACAAATGGATGTTGTGGATGTAGCAACCCTAAATCCTATGATGTACTCCAACCCTCCCCAAAACTCAAGATTTTAGTCTACCAAAACACAAACCCTACCATGTCCGGCGACAACCAACCCTTCTCCCAACTCCACACAAACCATCAAAACCCTAACAACAACAACATCATGTCAAAACCAAATTCAAAACTCATTCACAGTGTGGCCGTTGAGAAGGACTCAAACGACCCGCACAAGGATTTTCGAGACTCCATACTCCAAATGATCTTCCAGAGACAAATCTACACCAAAACCGATCTTCAAGACCTTCTCGAGTGCTTCCTCCATGTGGCCGTTGAGAAGGACTCAAACGACCCGCACAAGGATTTTCGAGACTCCATACTCCAAATGATCTTCCAGAGACAAATCTACACCAAAACCGATCTTCAAGACCTTCTCGAGTGCTTCCTCCAGTTGAACGCTGTCTGTCATCACCAAGTTATCGTTCGAGCATTCATGGAGATTTGTCAAGAAATCTTCCCCAAGAAGAATATCAACGCTGACGGCACAGTGCTTCTTTCAATAACAAAATTTGATGCATTTTCAGTTTATAGTGTGTAG 645 0.4326 MSSKKRKRFMRALFNTNGCCGCSNPKSYDVLQPSPKLKILVYQNTNPTMSGDNQPFSQLHTNHQNPNNNNIMSKPNSKLIHSVAVEKDSNDPHKDFRDSILQMIFQRQIYTKTDLQDLLECFLHVAVEKDSNDPHKDFRDSILQMIFQRQIYTKTDLQDLLECFLQLNAVCHHQVIVRAFMEICQEIFPKKNINADGTVLLSITKFDAFSVYSV* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01787 214 NCBIfam uncharacterized plant-specific domain TIGR01568 125 186 IPR006458 -
Phac5g01787 214 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 125 188 IPR038933 GO:0045892
Phac5g01787 214 ProSiteProfiles OVATE domain profile. 127 186 IPR006458 -
Phac5g01787 214 Pfam Transcriptional repressor, ovate 89 125 IPR006458 -
Phac5g01787 214 Pfam Transcriptional repressor, ovate 131 188 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01787 Phac-Chr5 38003092 38004299 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phac5g01787 Ovate 1.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01787 - - pvu:PHAVU_005G121000g 266.544