Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01766 ATGTTTGGGATAGGAGATTTGCCTTACCATAATGGGGGAGGACACTGGTTTTCTTCAGGGTCTCAGTCATCTCAACTCGGGATTCAAGAGGAGGACCGAGTCACTTCTTTGATTAAGAAAATGACTGTAAACAATTCAGTTATCATTGCAGGTGAAGGTATGATTGGACGGGCTGCATTTACAGGAAACCATCAGTGGATTCTTTTGAACAGTTTCACAAAAGATGTAAATCCACCTGAGTTATACCCTGAAGTGCATCACCAATTTTCAGCTGGAATACAGACGGTAGCAGTTATTCCTGTACTTCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTACCTATAAATGAGAATATGGGTTTTGTGAATGATGTGAAGAGCTTGATCTTGCAATTAGGATGGGTTCCTGGTGCCCTTCTATCTGAAGACTATTCAGAAAATCCCTCTATTGAACGACTTGCTGGACCTTCCATTACTGGTGTGCCGTTGTCAATTGATCCACCTGCCATTGCCTCAAATGGCACTCCCTCAGTAACTGATGGCTCCAATCAGAAAAGTAATCCATCTCATACTTCAAGGCCTTTTGTTCAAACACCTTGCCCTTTAAATGCAGAGACAAATACCTGCCAGGGTTCTGCACTGACACCAGAAACCTGTAAACTGAACCGGATATCCAGCAACCATTGCCAACCAAAGGTTATTCCAATGAGTAAAGCAAACTTTTCTGGCCAACAAGAGAGTAGAGCTATGGAGGCTGAAGTGATAACCTCAGATGTTGATTCATGCCTGCAGCAACATTCTGTTTCATATAATGCTAGATCTGCATTCAATAACTTGACTGCTTCTGGGTCTTTTGGTCAATCTTGTCTAAGTGATGATCATCTAACATTAATGGAGCAACAAATCATATCAGCCATTGGGAATCGAGATAATGTTAATCCTTTTTTTAATGTGTCAAGTACCTTAAACATGCCTCATCCAAACACAGATAGAGGCCACATACTTGGTCACAGTATGAGTTCTAGCAGTGCTCCTTTACCAGGAGGAATCCCAATACATGGTGGAATGAGTACTCTTTTGAGGTCAAATCTGATTACTAGTCCTGGTTCAAAATCTCCCAAAGCATCCACAGGTGATTTATCTGGAGTAGAAGTTGGGATTGGACTTCAAAATTCTAATTCTTCAACTAAAGCAAGGGGTTGTTCTTTGATGAATTCGACTAGTCAATCCGGCACCTTTCCCATGCATGTAGAAGGTTCTAATCAGAACATGCTCCCTGTAGATTTCAAGTGTGTTTCAACAAATCAAAAGATAGACTATGATTTGCTTCAGGCCCCTAACCTCCCCACTTTCCATGTTGAGAAACGTTTGCCCATTAGTGGTCAAATCCCTGGTTTTGCCCATGATTGCCTTAGTAAAGAGGGTAGTATTCAATCTATGATGGCAATGAATCCTAAACTCAAACTAGATTGTACTAAACCTCCATCCGGTGATGATGACTTGTTTGATGTTTTAGGGGTAGATATGAAAAACAAATTGCTGAATGGAAATTGGAATAAACTCTTTACAGACGAATTGGGTGCAAATACAGAAAATATGGACAAGAAGTTAGATCCTATGAATATGCTGGACACAACTACAAATCCGGATATATATTCAGTTAAAGAAGCAATAGACAGTGGCATTTTTTCTGGAACGGGAACAGACCACCTCTTGGATGCAGTGGTCTCCAAAGCCAAATCTGTTGTAAAACAGGATTCTGATGACATGTCGTGCAGGACAACATTGACAAGGAATAGTACCTCCTCTGTTCCCTCTCCTGCCTGCAGGCCGGTTATGTCTGGTCATTTCCAAGGGGGAATATTTGATTTTCCTAAGAATGGTGGTAAAACAGGTGCCACAGAAGCTAGTATTAGGTCCAGATGTAACAAGGAAGATGCTGGAAACTGTTCTCAAACTAGTTCTGCTTATGGCTCCCAACTTAGTTCGTGGGTTGAGAACAGTGGGAGCGTTAAACGTGAGAATAGTGTTTCAACTGGATACTCAAAGCAGCCAGATGAGGCTTGCAAACCCAATCGTAAAAGGCTTAAACCAGGAGAGAATCCCAGACCTCGTCCGAAAGATCGCCAAATGATTCAAGATCGAGTGAAAGAGTTAAGAGAAATTGTGCCAAACGGAGCAAAATGTAGCATAGATGCACTTTTGGAACGGACCATTAAGCACATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTAAAACAAACAGGGGAGTCTAAGATTATCAATAAGGAAGGTGGGCTGCTTTTGAAAGACAACTTTGAGGGAGGAGCTACATGGGCATATGAAGTTGGCTCACAATCAATGGTTTGTCCTATTGTAGTTGAGGATCTGAATCCTCCTCGTCAAATGCTAGTGGAGATGCTTTGTGAGGAGCAAGGTTTCTTTTTGGAAATAGCCGACTTAATCAGAGGATTAGGTTTAACCATATTGAAAGGAGTAATGGAAGCTCACAATGACAAAATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATGTAACAAGGATGGAAATATTCATGTCACTTGTTCGTCTTTTGGAGCAAACAGTGAAGGGAAAAGCATCTTCATCCAATGCAATTGATAACATGGTGTATCACACTTTTCCACAGACTGCTCAGATACCAGCAACTGGAAGGCCTAGTGGTTTGCAATGA 2724 0.417 MFGIGDLPYHNGGGHWFSSGSQSSQLGIQEEDRVTSLIKKMTVNNSVIIAGEGMIGRAAFTGNHQWILLNSFTKDVNPPELYPEVHHQFSAGIQTVAVIPVLPHGVVQLGSFLPINENMGFVNDVKSLILQLGWVPGALLSEDYSENPSIERLAGPSITGVPLSIDPPAIASNGTPSVTDGSNQKSNPSHTSRPFVQTPCPLNAETNTCQGSALTPETCKLNRISSNHCQPKVIPMSKANFSGQQESRAMEAEVITSDVDSCLQQHSVSYNARSAFNNLTASGSFGQSCLSDDHLTLMEQQIISAIGNRDNVNPFFNVSSTLNMPHPNTDRGHILGHSMSSSSAPLPGGIPIHGGMSTLLRSNLITSPGSKSPKASTGDLSGVEVGIGLQNSNSSTKARGCSLMNSTSQSGTFPMHVEGSNQNMLPVDFKCVSTNQKIDYDLLQAPNLPTFHVEKRLPISGQIPGFAHDCLSKEGSIQSMMAMNPKLKLDCTKPPSGDDDLFDVLGVDMKNKLLNGNWNKLFTDELGANTENMDKKLDPMNMLDTTTNPDIYSVKEAIDSGIFSGTGTDHLLDAVVSKAKSVVKQDSDDMSCRTTLTRNSTSSVPSPACRPVMSGHFQGGIFDFPKNGGKTGATEASIRSRCNKEDAGNCSQTSSAYGSQLSSWVENSGSVKRENSVSTGYSKQPDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIVVEDLNPPRQMLVEMLCEEQGFFLEIADLIRGLGLTILKGVMEAHNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGKASSSNAIDNMVYHTFPQTAQIPATGRPSGLQ* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01766 907 MobiDBLite consensus disorder prediction 668 711 - -
Phac5g01766 907 MobiDBLite consensus disorder prediction 668 685 - -
Phac5g01766 907 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 696 745 IPR011598 GO:0046983
Phac5g01766 907 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 26 901 IPR043561 GO:0003700|GO:0006355
Phac5g01766 907 MobiDBLite consensus disorder prediction 170 198 - -
Phac5g01766 907 CDD bHLH_AtLHW_like 700 769 - -
Phac5g01766 907 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 31 128 IPR025610 -
Phac5g01766 907 MobiDBLite consensus disorder prediction 687 711 - -
Phac5g01766 907 MobiDBLite consensus disorder prediction 164 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01766 Phac-Chr5 37841583 37847540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01766 492 901 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.589 2.86e-122 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01766 - - gmx:100787748 1412.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01766 5 37841583 37847540 Phac5g01766 5 37841583 37847540 ECH
Phac5g01766 5 37841583 37847540 Phac11g01434 11 11388520 11395303 PCT