Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01760 ATGGCGACGTACTTTCATGGAAGCACTTCGGAGATTCAATCTTCTGCAGATGGCTTGCAAACGCTTTACCTTATGAACCCGTCTTACGTACCTTATGCTGACGCGCCGCACCACCCAACACTTCTCGTCAATCCCAACGCTACCAACGCGCTCAACCTCGCGAGTCTCACCCACGCGCCTCCGGTATCACCTGCCGCCAACCACCACCAGCAAGTTATTCACGGCGTGTCAAACGTCCTTGGATCCGGAAATTCCGATGAACACGCTCACACCCGACAGTCTTTGTTCGGGGAAAATATCGCCGCCTTCCACGGCTTCTCCGGCGGAGCCTCCTCCACCGCCCCTCGCGTTCACTATAACCTCTGGGGTTCGGGGGTTGATCAACCTGGAACGCCTTCTAGCAGCTCAGGCGGCGGCGGTTTCCGGCGGCCCAGTCAGCAGGGGTTGTCTCTCAGCCTTTCCTCACAGCAAACAAATTTCAGGTCAGTTTCTGGCGAGCTTGAGATTGCCGGACAGGGCCACGTCGCCGGAACTGGGAACTCGCCGACATCGGCTGCGTCGACAGGAGTTTCCGGCCTGATTTTGGGGTCGAAGTATCTGAAAGCGACGCAGGAGCTTCTGGATGAAGTTGTTAACGTAGGAAAAGGAATCTACAAAGATGAAAAGTTCTCAGAGAAGGTGAAAGCGAATAAAGAATCTACAAATTCTGGTGCTGGTGCTGGTTCAAGTGGTGGAGGCGAAAACAGTGCAGGGAAGCAAATGGTTGAACTCAGCACCGCCCAGAGGCAAGAACTTCAGATGAAGAAGTCCAAGCTCGTCAACATGCTGGATGAGGTGGAACAAAGGTACAGGCAATATCACCACCAAATGCAAATCGTGGTATCATCATTTGAGCAAGCTGCGGGTTATGGGGCGGCAAAATCTTACACTGCCCTTGCCCTAAAGACTATCTCAAAGCAATTCCGGTGCCTGAAAGATGCAATCTCTGCACAAATCAAAGCCACGAGCAAGACATTGGGTGAAGATGATTGCTTAGGAGTGAAAGTAGAAGGGTCAAGGCTTAGGTATGTTGATCACCATCTTAGGCAACAAAGGGCACTGCAGCAGCTAGGAATGATTCAACCCAATGCATGGAGGCCACAAAGAGGCCTTCCAGAACGAGCCGTTTCCATTCTTCGAGCTTGGCTTTTTGAGCATTTTCTTCACCCCTACCCAAAGGACTCAGATAAAGCCATGCTTGCTAAACAAACTGGACTGGCTAGAAGCCAGGTGTCAAACTGGTTTATCAATGCCCGGGTTCGGCTGTGGAAGCCAATGGTTGAAGAAATGTACCTGGAAGAAATGAAGGATCATGAACAAGCGAACGGCTCAGAAAACAGCAGATCAAAAGAGTTGAGCAAGGAATTGGGGTCAACAGCAAATGTTGCACCAGAATCAGGAGCCATTAAACTAGATAATCTTCAATCAAAACAAGATAGCTTCAACAACCAAAACACTTCTCCAACTGAAATCTCAACAAATTCTTCAATGTCTCCCATCGGAGGGTCCCTTCAATCCCACTCTGGTTTCCATCTTGCAGGATCATCTGACGTGCAAAGGAGTCCAAACAAACCAAGAAATTTGGAAATGCAAAATTCTCCAAGTAGTATCCTCTCAGTGGACATGGAAATGAAGCATAATGGTGAACATGCAAATACTAGAGAAGCCAACACAAAGTTTGGCATTGAAAGGCACCACAAAGATGGATACCCTTTGATGAGTGGCAATACAAACCAAGGTGGGGGTTTTGGAGCGTTCGCCATGGAAGACATTGGAAACAGATTCAACGTCACTACTGAGCAACTGGCTTCAAGGTTCCATGGAAATGGTGTTTCTCTCACACTAGGTCTTCCCCACAATGAAAACCTTTCTATCTCAGGAACTCAGCATGGGTTTCTCTCACAGAATATTCATCTGGGAAGGAGACTTGAGATGGGAACGACTGGGAATGAATTTTGTGCTATCAACACTCCACCTTCATCCCACTCAGGAACAACTTATGAGAGCATTGATATTCAAAACAGAAAGAGGTTGGCAATTGGAGGAGAAAGTGAGTGA 2097 0.4845 MATYFHGSTSEIQSSADGLQTLYLMNPSYVPYADAPHHPTLLVNPNATNALNLASLTHAPPVSPAANHHQQVIHGVSNVLGSGNSDEHAHTRQSLFGENIAAFHGFSGGASSTAPRVHYNLWGSGVDQPGTPSSSSGGGGFRRPSQQGLSLSLSSQQTNFRSVSGELEIAGQGHVAGTGNSPTSAASTGVSGLILGSKYLKATQELLDEVVNVGKGIYKDEKFSEKVKANKESTNSGAGAGSSGGGENSAGKQMVELSTAQRQELQMKKSKLVNMLDEVEQRYRQYHHQMQIVVSSFEQAAGYGAAKSYTALALKTISKQFRCLKDAISAQIKATSKTLGEDDCLGVKVEGSRLRYVDHHLRQQRALQQLGMIQPNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKAMLAKQTGLARSQVSNWFINARVRLWKPMVEEMYLEEMKDHEQANGSENSRSKELSKELGSTANVAPESGAIKLDNLQSKQDSFNNQNTSPTEISTNSSMSPIGGSLQSHSGFHLAGSSDVQRSPNKPRNLEMQNSPSSILSVDMEMKHNGEHANTREANTKFGIERHHKDGYPLMSGNTNQGGGFGAFAMEDIGNRFNVTTEQLASRFHGNGVSLTLGLPHNENLSISGTQHGFLSQNIHLGRRLEMGTTGNEFCAINTPPSSHSGTTYESIDIQNRKRLAIGGESE* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01760 698 CDD homeodomain 378 439 IPR001356 GO:0003677
Phac5g01760 698 Pfam Associated with HOX 194 329 IPR006563 -
Phac5g01760 698 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 122 462 - -
Phac5g01760 698 SUPERFAMILY Homeodomain-like 379 445 IPR009057 -
Phac5g01760 698 MobiDBLite consensus disorder prediction 126 157 - -
Phac5g01760 698 MobiDBLite consensus disorder prediction 123 157 - -
Phac5g01760 698 FunFam BEL1-like homeodomain protein 9 381 443 - -
Phac5g01760 698 Gene3D - 381 460 - -
Phac5g01760 698 MobiDBLite consensus disorder prediction 450 465 - -
Phac5g01760 698 Coils Coil 262 289 - -
Phac5g01760 698 Pfam Homeobox KN domain 395 434 IPR008422 GO:0003677|GO:0006355
Phac5g01760 698 SMART prehox3 188 330 IPR006563 -
Phac5g01760 698 SMART HOX_1 378 442 IPR001356 GO:0003677
Phac5g01760 698 MobiDBLite consensus disorder prediction 491 545 - -
Phac5g01760 698 MobiDBLite consensus disorder prediction 229 253 - -
Phac5g01760 698 MobiDBLite consensus disorder prediction 450 477 - -
Phac5g01760 698 MobiDBLite consensus disorder prediction 230 253 - -
Phac5g01760 698 ProSiteProfiles 'Homeobox' domain profile. 375 438 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01760 Phac-Chr5 37761090 37767319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01760 1 690 Homeobox Transcription Factor Family AT2G35940 44.189 2.12e-136 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac5g01760 POX 4.2e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01760 - - gmx:100779075 1142.87