Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01734 ATGAGGTTGAAGGTGGTGTATTCTGTTCATCATGATTTGCCAGTGAAGCGTCATTTTTTGATGATCAAGGTTAGTGTTCCATGCAGCAGTTTGCTCACCATAGTTACAGTTAGATGTGGACACTGTGCCAATCTGCTATCAGTTAACATGGGAGCATCACTTCAACCTTTTCCTTCTCAAGAAACTCAGCATTTTTCTACCGTTGCTAAGTTACAGAGACAGCACCTAAGTGTTCAAGAAGCATGCAGCAAGGAACTGGGATCATCATCAAAATGCAAATCATTTGAGTCCGACCATGAGCAACCTAGGATTCCTCCCATTCGTCCTCCAGAGAAGAGACAGCGTGTTCCTTCTGCTTATAATCGGTTCATTAAAGAGGAAATACAAAGAATTAAGGCTAGTAATCCAGATATCAGTCACAGGGAAGCTTTTAGCACGGCTGCGAAAAACTGGGCACATTTCCCTCACATTCACTTTGGGTTAAAGCTGGATGGCAGTAAGCAAGCAAAGTTGGACCAGGGAGATGGTACTCAAAAGTCTAACGGATTTTACTGA 555 0.4288 MRLKVVYSVHHDLPVKRHFLMIKVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQPFPSQETQHFSTVAKLQRQHLSVQEACSKELGSSSKCKSFESDHEQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQAKLDQGDGTQKSNGFY* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01734 184 CDD HMG-box_SF 115 151 - -
Phac5g01734 184 SUPERFAMILY HMG-box 106 154 IPR036910 -
Phac5g01734 184 FunFam Axial regulator YABBY 106 175 - -
Phac5g01734 184 Pfam YABBY protein 22 161 IPR006780 GO:0007275
Phac5g01734 184 Gene3D High mobility group box domain 97 157 IPR036910 -
Phac5g01734 184 PANTHER PROTEIN YABBY 6-RELATED 21 171 IPR006780 GO:0007275
Phac5g01734 184 MobiDBLite consensus disorder prediction 93 116 - -
Phac5g01734 184 MobiDBLite consensus disorder prediction 93 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01734 Phac-Chr5 37559741 37567187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01734 21 184 C2C2-YABBY Transcription Factor Family AT1G08465 63.529 3.86e-66 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac5g01734 YABBY 4.2e-60 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01734 K25796 - gmx:100785458 279.256