Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01733 ATGCCTAGTGAAATTGAAAGTGATAATATTTGTTTGCCTTTTGCATTCGAAAATGGGTTTTGGCAGGTTAGTGTTCCATGCAGCAGTTTGCTCACCATAGTTACAGTTAGATGTGGACACTGTGCCAATCTGCTATCAGTTAACATGGGAGCATCACTTCAACCTTTTCCTTCTCAAGAAACTCAGCATTTTTCTACCGTTGCTAAGTTACAGAGACAGCACCTAAGTGTTCAAGAAGCATGCAGCAAGGAACTGGGATCATCATCAAAATGCAAATCATTTGAGTCCGACCATGAGCAACCTAGGATTCCTCCCATTCGTCCTCCAGAGAAGAGACAGCGTGTTCCTTCTGCTTATAATCGGTTCATTAAAGAGGAAATACAAAGAATTAAGGCTAGTAATCCAGATATCAGTCACAGGGAAGCTTTTAGCACGGCTGCGAAAAACGTGAGTTGA 456 0.4189 MPSEIESDNICLPFAFENGFWQVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQPFPSQETQHFSTVAKLQRQHLSVQEACSKELGSSSKCKSFESDHEQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNVS* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01733 151 Gene3D High mobility group box domain 96 149 IPR036910 -
Phac5g01733 151 CDD HMG-box_SF 114 148 - -
Phac5g01733 151 PANTHER PROTEIN YABBY 6-RELATED 8 150 IPR006780 GO:0007275
Phac5g01733 151 MobiDBLite consensus disorder prediction 88 115 - -
Phac5g01733 151 Pfam YABBY protein 16 149 IPR006780 GO:0007275
Phac5g01733 151 SUPERFAMILY HMG-box 105 146 IPR036910 -
Phac5g01733 151 MobiDBLite consensus disorder prediction 90 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01733 Phac-Chr5 37558922 37564731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01733 1 149 C2C2-YABBY Transcription Factor Family AT1G08465 54.777 6.05e-45 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac5g01733 YABBY 1.5e-50 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01733 K25796 - gmx:100785458 206.068