Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01725 ATGGAGGGTGCTGGGATGGAAGGGAATGATATCAATGATGACAGTAATAAGTCTGAGGCGCATTTGACTTCCGCCGCTGCTTTTGTTGAGGGTGGAATTCAGGATGCTTGTGATGATGCTTGTAGCATATGCCTCGAGGCCTTCTGTGACAGTGATCCTTCCACGGTTACCAGTTGCAAGCACGAGTTTCATCTTCAGTGCATTCTCGAATGGTGTCAAAGAAGCTCCCAGTGCCCCATGTGTTGGCAACCTATCAGTCTCAAAGATCCAACAAGCCAAGAATTACTTGAGGCAGTGGAAAGAGAGCGAAACTTTAGGATCAATCCACCTAGAAATGCCACAATATTTCATCATCCAACACTGGGGGATTTTGAGTTACAACATTTGCCAGTTGGAGCTAGTGATGCTGATCTTGAAGAGCGTATAATCCAACACTTGGCTGCTGCAGCAGCAATGGGAAGAGCACGCCACATTGCAAGAAGGGAAGGTCAGAGAAACAGGTCATCAGCTCAAGGTCGCCCACACTTTTTAGTTTTTTCGACTCATCCTAATTCACCTCCCATGGCTCCTACTTCTTCCTCTCCATCTCAGAGGGGAGATGATGAACCAACTCCTACAATTGCTGTTTCCAATCTGTCTCCAACTCATGCAACGGGAGAACAATCATCACAAGTGACTTTGGTTGCTCCGGTTCAAGCAGAACAGGTTTCTGCTTCAGGATCTGGATCTACTGCTCTTGGTACAGATCATCAGGGATCATCTTACAGCAATAGGAGATCTCCTAATCAGTCATCTCCAAGTAGTCAAGACAGAGCAGGGCCATCAGAATTCCAGTCATTTTCAGAGTCTCTGAAATCGAAACTGAATGCTGTGTCAACAAGGTTGTGGACTATATTGTATGTTGCATGTGGGTGTGGTAAAGTACAATGCTTTCCAATTGTAATTTCTATTTTTTCTCGTTTTTCAGATACAAGGAGTCAATTTCCAAGAGTACAAGAGGGTGGAAGGAGAGATGGTTTTCTCGTAACAATGCTATGTCTGATATTGGATCTGATGTTAGGCGAGAAGTTAATGCAGGGATTGCAACTGTGTCACGCATGA 1101 0.4487 MEGAGMEGNDINDDSNKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRINPPRNATIFHHPTLGDFELQHLPVGASDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFLVFSTHPNSPPMAPTSSSPSQRGDDEPTPTIAVSNLSPTHATGEQSSQVTLVAPVQAEQVSASGSGSTALGTDHQGSSYSNRRSPNQSSPSSQDRAGPSEFQSFSESLKSKLNAVSTRLWTILYVACGCGKVQCFPIVISIFSRFSDTRSQFPRVQEGGRRDGFLVTMLCLILDLMLGEKLMQGLQLCHA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01725 366 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 20 90 - -
Phac5g01725 366 MobiDBLite consensus disorder prediction 184 278 - -
Phac5g01725 366 FunFam E3 ubiquitin-protein ligase RHF2A 12 115 - -
Phac5g01725 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 90 IPR013083 -
Phac5g01725 366 Pfam Ring finger domain 40 81 IPR001841 -
Phac5g01725 366 MobiDBLite consensus disorder prediction 157 278 - -
Phac5g01725 366 SMART ring_2 41 81 IPR001841 -
Phac5g01725 366 SUPERFAMILY RING/U-box 34 89 - -
Phac5g01725 366 ProSiteProfiles Zinc finger RING-type profile. 41 81 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01725 Phac-Chr5 37518248 37523076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01725 38 89 C3H Transcription Factor Family AT4G00335 44.231 5.67e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01725 K19043 - gmx:100814908 519.62