Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01698 ATGTCACAGTTACCAGAAACAGGTCTCCATCATCTTCTCCAAACACAAACACAAACACCAACACCAACACCACCTCCACCATCCCCTTCCAAGTCAACCATACCTCTGATAACAAAAGGCCCCACATGGATGAGATGGACTTCTTCCCTAACAAAACCGATGATGATCATAACAAAGACTGGTTTGAATCTTCTCACCACCAACACTGGTAGTGATCATTCCATGGTGGACGATGAGACATCCACTAATTCAGAAGAAAAAAGAGCCAAGAGTGAGATGGTTGTTCTTCAAGCTGAGCTTGAGAGAATGAAGGTGGAGAATCATAGGCTGAGGAACATGCTTGATCAGGTTAACACCAATTACAATGCCTTGCAGATGCATTTGGTGAGTTTGATGCAAGAACAAAAGGAGGAGGAGGGTGAGCAAAAAGTGTTTGATGGAAAATTAGATGAGGAAAAACAAAGTGGGAATGGAGCCTTGGTGCCAAGACAATTTATGGATCTTGGGTTGGCTAGTAATGCTGATAATAATGAACCTTCCCATTCTTCCTCGGTGGGAAAAAGTCAGGATCTGTCAAAGTCGCCAATAAATAATGAGGTAGCATCCAAGGAATTTGACACCAAGAAGAATGGGAGTGTTAGTGATGAAGGATTTGATCAAGACAAGAAGGAATTTGGAAGGGGAATTGAAAGAGAAGACAGTCCTTCAGAAGGGATTGCCGCTAATAGCAATGTTCCAAAGTTTAGTCCTCCAAGAAACGTTGATCAAGCTGAAGCTACCATGAGAAAGGCAAGAGTTTCTGTTAGAGCTCGATCAGAGGCACCAATGATCACTGATGGGTGTCAATGGCGAAAGTATGGGCAGAAGATGGCCAAAGGAAACCCATGTCCTCGAGCATATTATAGATGTACCATGGCAGCAGGTTGTCCAGTGAGAAAACAGGTGCAAAGGTGTGCTGAAGACCGAACAATACTGATCACAACATATGAAGGGAATCACAACCACCCTTTGCCTCCAGCAGCCATGGCAATGGCACAAACCACTTCCTCAGCAGCTAGAATGCTGCTTTCAGGATCCATGTCAAGTGCTGATGGCCTAATGAATGCAAACTTCCTCACAAGGACACTCCTCCCTTGCTCTTCTAGCATGGCCACTATCTCAGCATCAGCTCCATTCCCAACTGTTACATTGGATTTGACTCAGTCTCCAAATCCACTACAGTTCCCAAAGCCCCCAAACCAATTCCAAATCCCCTTCCCTGGTGTCCCTCAGAATTTTGCCAATTCCTCAGCCTCATTGCTGCCTCAGATATTCGGCCAGGCACTGTATAATCAGTCCAAGTTTTCTGGCCTCCAAATGTCTCAAGATGCAGACCCTTCCCCACTAAGTAATCAATCTCAACGGCCACCACCACACCTTGCTGACACGGTTAGTGCTGCCACTGCTGCCATTGCAGCTGACCCCAACTTCACAGCAGCTTTGGCAGCAGCAATCACTTCTATTATTGGGGGTGCACAGCCAAGCAACAGTACCAGTACCAATAATAATGGCACCACATCCAACACCACCAGCAATGCCAATGTTACATCAAACAACAACAAATAA 1605 0.4548 MSQLPETGLHHLLQTQTQTPTPTPPPPSPSKSTIPLITKGPTWMRWTSSLTKPMMIITKTGLNLLTTNTGSDHSMVDDETSTNSEEKRAKSEMVVLQAELERMKVENHRLRNMLDQVNTNYNALQMHLVSLMQEQKEEEGEQKVFDGKLDEEKQSGNGALVPRQFMDLGLASNADNNEPSHSSSVGKSQDLSKSPINNEVASKEFDTKKNGSVSDEGFDQDKKEFGRGIEREDSPSEGIAANSNVPKFSPPRNVDQAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSADGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTQSPNPLQFPKPPNQFQIPFPGVPQNFANSSASLLPQIFGQALYNQSKFSGLQMSQDADPSPLSNQSQRPPPHLADTVSAATAAIAADPNFTAALAAAITSIIGGAQPSNSTSTNNNGTTSNTTSNANVTSNNNK* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01698 534 MobiDBLite consensus disorder prediction 451 472 - -
Phac5g01698 534 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 69 518 IPR044810 GO:0003700
Phac5g01698 534 MobiDBLite consensus disorder prediction 170 253 - -
Phac5g01698 534 MobiDBLite consensus disorder prediction 68 91 - -
Phac5g01698 534 Coils Coil 86 134 - -
Phac5g01698 534 SMART WRKY_cls 277 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01698 534 MobiDBLite consensus disorder prediction 170 201 - -
Phac5g01698 534 MobiDBLite consensus disorder prediction 451 474 - -
Phac5g01698 534 MobiDBLite consensus disorder prediction 15 37 - -
Phac5g01698 534 ProSiteProfiles WRKY domain profile. 272 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01698 534 FunFam probable WRKY transcription factor 31 262 339 - -
Phac5g01698 534 MobiDBLite consensus disorder prediction 504 534 - -
Phac5g01698 534 Pfam WRKY DNA -binding domain 279 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01698 534 MobiDBLite consensus disorder prediction 202 234 - -
Phac5g01698 534 Gene3D WRKY domain 262 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g01698 534 MobiDBLite consensus disorder prediction 133 158 - -
Phac5g01698 534 SUPERFAMILY WRKY DNA-binding domain 270 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g01698 534 MobiDBLite consensus disorder prediction 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01698 Phac-Chr5 37337552 37341021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01698 60 516 WRKY Transcription Factor Family AT1G62300 52.842 7.58e-136 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac5g01698 WRKY 2.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01698 - - gmx:100127384 692.575