Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01697 ATGGCAAGAGGGGGTGGACTCTCCATTGATTCAGATCCAATTGGGAGCTTCTTCCCCCACAAACCAGTAGTTCTCAACTCTTTCCCTGAAGACAACAATACCATCAACAACAGCAGTAGCCAACACAAGTGGAAACTTGGTCCCAACATGGATGTCACAGTTACCAGAAACAGGTCTCCATCATCTTCTCCAAACACAAACACAAACACCAACACCAACACCACCTCCACCATCCCCTTCCAAGTCAACCATACCTCTGATAACAAAAGGCCCCACATGGATGAGATGGACTTCTTCCCTAACAAAACCGATGATGATCATAACAAAGGTATAAACAATTTTGCCTCTGCCTCCACCTCCGCACCTCCCTCACTTGACCACCTTGTTCACACACATGATCATTCATCCACTCCTGCTATCTTGGAATTGAAAGTAAACACTGGTTTGAATCTTCTCACCACCAACACTGGTAGTGATCATTCCATGGTGGACGATGAGACATCCACTAATTCAGAAGAAAAAAGAGCCAAGAGTGAGATGGTTGTTCTTCAAGCTGAGCTTGAGAGAATGAAGGTGGAGAATCATAGGCTGAGGAACATGCTTGATCAGGTTAACACCAATTACAATGCCTTGCAGATGCATTTGGTGAGTTTGATGCAAGAACAAAAGGAGGAGGAGGGTGAGCAAAAAGTGTTTGATGGAAAATTAGATGAGGAAAAACAAAGTGGGAATGGAGCCTTGGTGCCAAGACAATTTATGGATCTTGGGTTGGCTAGTAATGCTGATAATAATGAACCTTCCCATTCTTCCTCGGTGGGAAAAAGTCAGGATCTGTCAAAGTCGCCAATAAATAATGAGGTAGCATCCAAGGAATTTGACACCAAGAAGAATGGGAGTGTTAGTGATGAAGGATTTGATCAAGACAAGAAGGAATTTGGAAGGGGAATTGAAAGAGAAGACAGTCCTTCAGAAGGGATTGCCGCTAATAGCAATGTTCCAAAGTTTAGTCCTCCAAGAAACGTTGATCAAGCTGAAGCTACCATGAGAAAGGCAAGAGTTTCTGTTAGAGCTCGATCAGAGGCACCAATGATCACTGATGGGTGTCAATGGCGAAAGTATGGGCAGAAGATGGCCAAAGGAAACCCATGTCCTCGAGCATATTATAGATGTACCATGGCAGCAGGTTGTCCAGTGAGAAAACAGGTGCAAAGGTGTGCTGAAGACCGAACAATACTGATCACAACATATGAAGGGAATCACAACCACCCTTTGCCTCCAGCAGCCATGGCAATGGCACAAACCACTTCCTCAGCAGCTAGAATGCTGCTTTCAGGATCCATGTCAAGTGCTGATGGCCTAATGAATGCAAACTTCCTCACAAGGACACTCCTCCCTTGCTCTTCTAGCATGGCCACTATCTCAGCATCAGCTCCATTCCCAACTGTTACATTGGATTTGACTCAGTCTCCAAATCCACTACAGTTCCCAAAGCCCCCAAACCAATTCCAAATCCCCTTCCCTGGTGTCCCTCAGAATTTTGCCAATTCCTCAGCCTCATTGCTGCCTCAGATATTCGGCCAGGCACTGTATAATCAGTCCAAGTTTTCTGGCCTCCAAATGTCTCAAGATGCAGACCCTTCCCCACTAAGTAATCAATCTCAACGGCCACCACCACACCTTGCTGACACGGTTAGTGCTGCCACTGCTGCCATTGCAGCTGACCCCAACTTCACAGCAGCTTTGGCAGCAGCAATCACTTCTATTATTGGGGGTGCACAGCCAAGCAACAGTACCAGTACCAATAATAATGGCACCACATCCAACACCACCAGCAATGCCAATGTTACATCAAACAACAACAAATAA 1866 0.4566 MARGGGLSIDSDPIGSFFPHKPVVLNSFPEDNNTINNSSSQHKWKLGPNMDVTVTRNRSPSSSPNTNTNTNTNTTSTIPFQVNHTSDNKRPHMDEMDFFPNKTDDDHNKGINNFASASTSAPPSLDHLVHTHDHSSTPAILELKVNTGLNLLTTNTGSDHSMVDDETSTNSEEKRAKSEMVVLQAELERMKVENHRLRNMLDQVNTNYNALQMHLVSLMQEQKEEEGEQKVFDGKLDEEKQSGNGALVPRQFMDLGLASNADNNEPSHSSSVGKSQDLSKSPINNEVASKEFDTKKNGSVSDEGFDQDKKEFGRGIEREDSPSEGIAANSNVPKFSPPRNVDQAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSADGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTQSPNPLQFPKPPNQFQIPFPGVPQNFANSSASLLPQIFGQALYNQSKFSGLQMSQDADPSPLSNQSQRPPPHLADTVSAATAAIAADPNFTAALAAAITSIIGGAQPSNSTSTNNNGTTSNTTSNANVTSNNNK* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01697 621 SMART WRKY_cls 364 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01697 621 MobiDBLite consensus disorder prediction 29 82 - -
Phac5g01697 621 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 151 605 IPR044810 GO:0003700
Phac5g01697 621 SUPERFAMILY WRKY DNA-binding domain 357 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g01697 621 Gene3D WRKY domain 349 426 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g01697 621 MobiDBLite consensus disorder prediction 220 245 - -
Phac5g01697 621 MobiDBLite consensus disorder prediction 220 240 - -
Phac5g01697 621 MobiDBLite consensus disorder prediction 257 288 - -
Phac5g01697 621 MobiDBLite consensus disorder prediction 257 340 - -
Phac5g01697 621 FunFam probable WRKY transcription factor 31 349 426 - -
Phac5g01697 621 Pfam WRKY DNA -binding domain 366 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01697 621 Coils Coil 173 221 - -
Phac5g01697 621 MobiDBLite consensus disorder prediction 538 559 - -
Phac5g01697 621 ProSiteProfiles WRKY domain profile. 359 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01697 621 MobiDBLite consensus disorder prediction 156 178 - -
Phac5g01697 621 MobiDBLite consensus disorder prediction 289 321 - -
Phac5g01697 621 MobiDBLite consensus disorder prediction 591 621 - -
Phac5g01697 621 MobiDBLite consensus disorder prediction 538 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01697 Phac-Chr5 37337552 37341021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01697 145 603 WRKY Transcription Factor Family AT1G62300 54.008 2.76e-136 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac5g01697 WRKY 3.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01697 - - gmx:100127384 860.907