Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01688 ATGGCGAGAACAGTCTCCAACAACGACAGCACCAACGATGAAACAGGCGACGACAGCAATGCTACAACGAAGGACGAGAGCGATGTCAAAGGTCGCGTGAGGAAGGGGCCGTGGACCCCAGCAGAAGACGCGATCCTTGTAGAGTACGTGAAGAAGCACGGTGAAGGGAATTGGAACTCCGTGCACAAAAATTCTGGGTTGTTCAGGTGCGGCAAAAGTTGCAGACTTCGCTGGGCCAACCACCTCAGGCCTAATCTCAAGAAAGGTGCATTCTCTCCTGAGGAAGAACAAGTCATCATCGACCTTCATTCCAAGCTTGGAAACAAATGGGCCCGAATGGCCGCACAGTTACCTGGCAGGACCGACAATGAAATAAAGAACTTTTGGAACACCAGAATGAAAAGGCGTCAGAGAGCAGGGTTGCCCATTTATCCTCCTGAGGTGCATGTAGAAGCCACTGCATACCATCTACAACACCGCTACTTGGAACACCAACCTCATTCATCTGCATCATTTGCTTTACTCCTATCTTCTTGTTACCCCAAGAAGCTCAATGACCCTAGCCAATCCAATAATTCCAATCCGAATCCGCTGCAAAACCAACCTGATTCTTCCAACTGTTACATTAATCCAAGCCAGAAGCACTTCAAGTTTTCCAATGAAAATGGTGGAAATTCAAATCTTGCTTTGCCATTATCCCCTCTTTCTCCGTATGGATCATCATCCTCCACCCTTCTTAACCACAGTTTTGGTGATCATGGCTTCATAGCAGGATCCCCGTATGAACCCTTTCCTCTGGTGCCAGGCTCCACCCCTGACATCTCTTCCAACCAAACACCAACCCCTGCTTCATCCTATGCTAGTGGTGTCGATGGCCTGATGGGATCTTCAAGCATGGTTAATAATAATAATAATAATAATGACTACTATGAAGTTGCACCATTGTCTCCTCCAGGAAACAGTGGCCTGCTGGATGCTCTAGTGATGGAGGCTCAAGGTCTTTCTCACAATGACAAGTCCAAGAATGAGGAGGATCCAACCCTTTCTGGGAAGCTATCTTGTAAGAGAAAGAACTTGGAATATGCAGAGGAGGGAGGCACTCCGCCTATGGTGTCAGCCATGAAGAAGAACAGTAGCAATAGTACTACTACTGAAAACCAGAGGGATGATGATAACAGCTCCTCTCAATGGTCAAAAGGGAAGAAAGTGATGGGGGAGGATCCAATGGAAGAGATGAACTCGATGGACGATGACTTGTTTAGTCTGCTGAACCAGTTTCCCTTAGAAATGCCAATGCCTGAGTGGTACCGTAGAGGAGAAAGTCAGTCATTGGGACTTGAAAACCAGCCCAATGCTTCACCACCTGACCCCGCTGATCAAGAGTATGCTTGGACTCTCGGAACTTGCTGGAACAACATGCCCAGCATATGCTAA 1434 0.4756 MARTVSNNDSTNDETGDDSNATTKDESDVKGRVRKGPWTPAEDAILVEYVKKHGEGNWNSVHKNSGLFRCGKSCRLRWANHLRPNLKKGAFSPEEEQVIIDLHSKLGNKWARMAAQLPGRTDNEIKNFWNTRMKRRQRAGLPIYPPEVHVEATAYHLQHRYLEHQPHSSASFALLLSSCYPKKLNDPSQSNNSNPNPLQNQPDSSNCYINPSQKHFKFSNENGGNSNLALPLSPLSPYGSSSSTLLNHSFGDHGFIAGSPYEPFPLVPGSTPDISSNQTPTPASSYASGVDGLMGSSSMVNNNNNNNDYYEVAPLSPPGNSGLLDALVMEAQGLSHNDKSKNEEDPTLSGKLSCKRKNLEYAEEGGTPPMVSAMKKNSSNSTTTENQRDDDNSSSQWSKGKKVMGEDPMEEMNSMDDDLFSLLNQFPLEMPMPEWYRRGESQSLGLENQPNASPPDPADQEYAWTLGTCWNNMPSIC* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01688 477 MobiDBLite consensus disorder prediction 335 413 - -
Phac5g01688 477 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 13 443 - -
Phac5g01688 477 MobiDBLite consensus disorder prediction 1 17 - -
Phac5g01688 477 FunFam MYB-related transcription factor 34 87 - -
Phac5g01688 477 FunFam Transcription factor MYB97 90 168 - -
Phac5g01688 477 MobiDBLite consensus disorder prediction 336 362 - -
Phac5g01688 477 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Phac5g01688 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
Phac5g01688 477 Gene3D - 35 87 - -
Phac5g01688 477 MobiDBLite consensus disorder prediction 372 400 - -
Phac5g01688 477 Pfam Myb-like DNA-binding domain 38 97 - -
Phac5g01688 477 SUPERFAMILY Homeodomain-like 32 129 IPR009057 -
Phac5g01688 477 MobiDBLite consensus disorder prediction 1 36 - -
Phac5g01688 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 82 IPR017930 -
Phac5g01688 477 MobiDBLite consensus disorder prediction 439 459 - -
Phac5g01688 477 MobiDBLite consensus disorder prediction 18 36 - -
Phac5g01688 477 Gene3D - 90 136 - -
Phac5g01688 477 SMART sant 34 84 IPR001005 -
Phac5g01688 477 SMART sant 87 135 IPR001005 -
Phac5g01688 477 CDD SANT 37 82 IPR001005 -
Phac5g01688 477 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Phac5g01688 477 MobiDBLite consensus disorder prediction 185 222 - -
Phac5g01688 477 CDD SANT 90 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01688 Phac-Chr5 37198700 37202847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01688 31 477 MYB Transcription Factor Family AT2G32460 38.123 1.12e-80 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac5g01688 Myb_DNA-bind_6 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01688 K09422 - gmx:100798860 722.235