Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01675 ATGAAGAAATTCAAGGTTTTGCACCTTGTGACATGGATTTGGATATGTGGTGTTGCTCACAGCACAAGGCCTGCCAGTGTGAACATTGGTGCGGTTTTTGCTTTCAATTCGGTCATAGGTAGAGCTGCGAAGGAAGCTATGGAAATGGCCGTTTCTGATGTCAATGGGGACCCCACAGTTCTCAAGGGAACCAAACTCAACTTGATAATGAAGGATGCCATGTGCAATGCTTTTCTGGGAGCAATTGGAGCTTTTCAGTTACTTGAGAAAGGGGTTGCAGCCATAATTGGTCCCCAGTCATCTGCCGTAGCTCACACAGTTTCTCAAATTGCTGATGCTCTCCAAGTTCCTCTTGTTTCCTATGCTGCCACTGATCCAACCCTGTCCTCCCTTCAGTTTCCTTTCTTTATTCGATCTACGCAAAGCGACTTGGCACAAATGACCGCAATGGCTGATCTAATTGACTTTAATGGATGGAAAGAGGTCATTGTTGTATTCTTAGATGATGATTATGGAAGAAATGGAATATCTGCTTTGAGTGATGAACTTGAAAAGAGGAGATTGAAAATTTCTTATAAACTGCCTTTGAGTATTAAGTTTGATCTGGATGAAATCACCAACTTACTCAATCAATCCAAATTGTTTGGTCCTCGTGTTTATGTTGTTCATGTCAACCCTGATCCGAGATTGAGAATTTTTTCTGTTGCCCATAAACTTCAAATGATAGCCAAGGATTATGTCTGGCTTGTCACGGATTGGCTCTCAGCTACGATAGGTTCATTATCCCCAGTGAATCAGACCTCTTTCAGTGTTCTCCAAGGGGTCGTTGGTCTTCGTCAACACATTTTGGATTCCAGGAAAAAGAGAGCTTTCGTTTCTCGGTGGACAAAAATGCAAAGAGATGGATTGACAAATGCTAGTTTGAACTCCTATGGATTTTCTGCTTATGACACAGTTTGGGCAATTGCACTTTCAATTGATAAATTCATCAAAGTAAATAATTTTACCTTCATGCTTCATGATAAGTATAAGCTATCTCATACAGAAGGAATTGGCGTTCAGCTTGACAAACTCAAAATCTTCACTGGTGGATCTGATCTGGTCAAGATATTATTACAATCAAATTTTACTGGTGTGAGTGGTCAAGTTATGTTTAATTCTGATAGAAATATTGTAAGTGGTGGTTATGATATTATCAATGTCAATCAGTTGGGAATTACTAGGGTTGGTTTTTGGTCTAATTATACGGGATTTTCAGTTGTACCCCCTGAGACTCTTAAAAAAAGGGAACACAGCAGGTTTTCCAAAGATCAGAAGCTTGGCAACATTACTTGGCCAGGTGGAAAGACAGATCGACCACGTGGCTGGGTGATTGCTGATAATACCAAGCCACTGAGAATTGGAGTGCCAAAAAGAGCAAGTTTTGTTGAATTTGTAACTGAAGTGCCAAATAGTCATGAAATTCATGGGTATTGCATCGATGTGTTCAAGAAAGCCCTAGAATTTATCCCATATGAAGTTCCCTTTGTATTCAAGTCTTTCGGGAATGGTAAAGCAAATCCCAATTATGATGAACTTGTGAAAAGGGTTGCTGATAATGTATATGATGCTGTTGTTGGAGACATTGCAATTGTGACAAACCGTACAAGGATTGTTGATTTTTCTCAGCCTTTTGCATCATCTAGCCTCGTCATAGTGGCTCCTATCAACAAAGCAGGATCAAATGCTTGGGTCTTCCTCAAACCATTTACAGCAGATATGTGGTGTGCTACTGCTGCCTCATTTTTGGTGATTGGAATTGTTATATGGATTCTTGAGCACCGAGTCAACAATGACTTCCGTGGTCCTCCTAAGAAGCAAATTATAACAATGTTAATGTTCAGCCTCTCAACCCTGTTTAAGAAAAATCGTAAGAAAACATCTTGTTCCAAAGTCTAA 1938 0.4004 MKKFKVLHLVTWIWICGVAHSTRPASVNIGAVFAFNSVIGRAAKEAMEMAVSDVNGDPTVLKGTKLNLIMKDAMCNAFLGAIGAFQLLEKGVAAIIGPQSSAVAHTVSQIADALQVPLVSYAATDPTLSSLQFPFFIRSTQSDLAQMTAMADLIDFNGWKEVIVVFLDDDYGRNGISALSDELEKRRLKISYKLPLSIKFDLDEITNLLNQSKLFGPRVYVVHVNPDPRLRIFSVAHKLQMIAKDYVWLVTDWLSATIGSLSPVNQTSFSVLQGVVGLRQHILDSRKKRAFVSRWTKMQRDGLTNASLNSYGFSAYDTVWAIALSIDKFIKVNNFTFMLHDKYKLSHTEGIGVQLDKLKIFTGGSDLVKILLQSNFTGVSGQVMFNSDRNIVSGGYDIINVNQLGITRVGFWSNYTGFSVVPPETLKKREHSRFSKDQKLGNITWPGGKTDRPRGWVIADNTKPLRIGVPKRASFVEFVTEVPNSHEIHGYCIDVFKKALEFIPYEVPFVFKSFGNGKANPNYDELVKRVADNVYDAVVGDIAIVTNRTRIVDFSQPFASSSLVIVAPINKAGSNAWVFLKPFTADMWCATAASFLVIGIVIWILEHRVNNDFRGPPKKQIITMLMFSLSTLFKKNRKKTSCSKV* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01675 645 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 27 631 IPR015683 -
Phac5g01675 645 Gene3D - 576 643 - -
Phac5g01675 645 SMART GluR_14 466 639 IPR001320 GO:0015276|GO:0016020
Phac5g01675 645 Pfam Ligated ion channel L-glutamate- and glycine-binding site 482 566 IPR019594 GO:0004970|GO:0016020
Phac5g01675 645 Gene3D - 142 418 - -
Phac5g01675 645 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 40 56 - -
Phac5g01675 645 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 231 254 - -
Phac5g01675 645 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 100 128 - -
Phac5g01675 645 Gene3D - 457 575 - -
Phac5g01675 645 FunFam Glutamate receptor 142 300 - -
Phac5g01675 645 SUPERFAMILY Periplasmic binding protein-like II 443 591 - -
Phac5g01675 645 Gene3D - 45 393 - -
Phac5g01675 645 SUPERFAMILY Periplasmic binding protein-like I 22 456 IPR028082 -
Phac5g01675 645 CDD PBP1_GABAb_receptor_plant 28 422 IPR044440 -
Phac5g01675 645 Pfam Receptor family ligand binding region 44 402 IPR001828 -
Phac5g01675 645 FunFam Glutamate receptor 460 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01675 Phac-Chr5 36943238 36949116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01675 23 640 Ion Channels AT2G32400 57.097 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01675 K05387 - gmx:100784247 1115.91