Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01674 ATGAAGAAATTCAAGGTTTTGCACCTTGTGACATGGATTTGGATATGTGGTGTTGCTCACAGCACAAGGCCTGCCAGTGTGAACATTGGTGCGGTTTTTGCTTTCAATTCGGTCATAGGTAGAGCTGCGAAGGAAGCTATGGAAATGGCCGTTTCTGATGTCAATGGGGACCCCACAGTTCTCAAGGGAACCAAACTCAACTTGATAATGAAGGATGCCATGTGCAATGCTTTTCTGGGAGCAATTGGAGCTTTTCAGTTACTTGAGAAAGGGGTTGCAGCCATAATTGGTCCCCAGTCATCTGCCGTAGCTCACACAGTTTCTCAAATTGCTGATGCTCTCCAAGTTCCTCTTGTTTCCTATGCTGCCACTGATCCAACCCTGTCCTCCCTTCAGTTTCCTTTCTTTATTCGATCTACGCAAAGCGACTTGGCACAAATGACCGCAATGGCTGATCTAATTGACTTTAATGGATGGAAAGAGGTCATTGTTGTATTCTTAGATGATGATTATGGAAGAAATGGAATATCTGCTTTGAGTGATGAACTTGAAAAGAGGAGATTGAAAATTTCTTATAAACTGCCTTTGAGTATTAAGTTTGATCTGGATGAAATCACCAACTTACTCAATCAATCCAAATTGTTTGGTCCTCGTGTTTATGTTGTTCATGTCAACCCTGATCCGAGATTGAGAATTTTTTCTGTTGCCCATAAACTTCAAATGATAGCCAAGGATTATGTCTGGCTTGTCACGGATTGGCTCTCAGCTACGATAGGTTCATTATCCCCAGTGAATCAGACCTCTTTCAGTGTTCTCCAAGGGGTCGTTGGTCTTCGTCAACACATTTTGGATTCCAGGAAAAAGAGAGCTTTCGTTTCTCGGTGGACAAAAATGCAAAGAGATGGATTGACAAATGCTAGTTTGAACTCCTATGGATTTTCTGCTTATGACACAGTTTGGGCAATTGCACTTTCAATTGATAAATTCATCAAAGTAAATAATTTTACCTTCATGCTTCATGATAAGTATAAGCTATCTCATACAGAAGGAATTGGCGTTCAGCTTGACAAACTCAAAATCTTCACTGGTGGATCTGATCTGGTCAAGATATTATTACAATCAAATTTTACTGGTGTGAGTGGTCAAGTTATGTTTAATTCTGATAGAAATATTGTAAGTGGTGGTTATGATATTATCAATGTCAATCAGTTGGGAATTACTAGGGTTGGTTTTTGGTCTAATTATACGGGATTTTCAGTTGTACCCCCTGAGACTCTTAAAAAAAGGGAACACAGCAGGTTTTCCAAAGATCAGAAGCTTGGCAACATTACTTGGCCAGGTGGAAAGACAGATCGACCACGTGGCTGGGTGATTGCTGATAATACCAAGCCACTGAGAATTGGAGTGCCAAAAAGAGCAAGTTTTGTTGAATTTGTAACTGAAGTGCCAAATAGTCATGAAATTCATGGGTATTGCATCGATGTGTTCAAGAAAGCCCTAGAATTTATCCCATATGAAGTTCCCTTTGTATTCAAGTCTTTCGGGAATGGTAAAGCAAATCCCAATTATGATGAACTTGTGAAAAGGGTTGCTGATAATGTATATGATGCTGTTGTTGGAGACATTGCAATTGTGACAAACCGTACAAGGATTGTTGATTTTTCTCAGCCTTTTGCATCATCTAGCCTCGTCATAGTGGCTCCTATCAACAAAGCAGGATCAAATGCTTGGGTCTTCCTCAAACCATTTACAGCAGATATGTGGTGTGCTACTGCTGCCTCATTTTTGGTGATTGGAATTGTTATATGGATTCTTGAGCACCGAGTCAACAATGACTTCCGTGGTCCTCCTAAGAAGCAAATTATAACAATGTTAATGTTCAGCCTCTCAACCCTGTTTAAGAAAAATCAGGAAGATACCATAAGCTCCCTTTCTAAAATGGTGATGATAGTCTGGCTTTTTCTATTGATGGTGATCACGGCTAGCTATACAGCTAGCTTGACTTCAATTCTTACAGTGGAGCAGCTTTCATCACCCATCACAGGAATTGAGAGCTTGATTGGAAGTAACTGGCCGATCGGATACCAAGTAGGGTCATTTGCTTACAGCTATCTGGCAGATAATCTTTATGTATCAAAATCAAGGCTTATTCCACTAGGCTCCCCCGAGGAATATGCTTTAGCACTGCAGAAGGGACCGTCTGGTGGAGGGGTGGCAGCTATCGTCGATGAGCTTCCGTATGTTGAGTTATTTCTGTCAAAAGAAACTGATTTTGGTATCATTGGACAGCCATTTGCAAAAAGCAGTTGGGGATTTGTAAGTGGCCATCTTACTAGAATATCAAAATGA 2349 0.407 MKKFKVLHLVTWIWICGVAHSTRPASVNIGAVFAFNSVIGRAAKEAMEMAVSDVNGDPTVLKGTKLNLIMKDAMCNAFLGAIGAFQLLEKGVAAIIGPQSSAVAHTVSQIADALQVPLVSYAATDPTLSSLQFPFFIRSTQSDLAQMTAMADLIDFNGWKEVIVVFLDDDYGRNGISALSDELEKRRLKISYKLPLSIKFDLDEITNLLNQSKLFGPRVYVVHVNPDPRLRIFSVAHKLQMIAKDYVWLVTDWLSATIGSLSPVNQTSFSVLQGVVGLRQHILDSRKKRAFVSRWTKMQRDGLTNASLNSYGFSAYDTVWAIALSIDKFIKVNNFTFMLHDKYKLSHTEGIGVQLDKLKIFTGGSDLVKILLQSNFTGVSGQVMFNSDRNIVSGGYDIINVNQLGITRVGFWSNYTGFSVVPPETLKKREHSRFSKDQKLGNITWPGGKTDRPRGWVIADNTKPLRIGVPKRASFVEFVTEVPNSHEIHGYCIDVFKKALEFIPYEVPFVFKSFGNGKANPNYDELVKRVADNVYDAVVGDIAIVTNRTRIVDFSQPFASSSLVIVAPINKAGSNAWVFLKPFTADMWCATAASFLVIGIVIWILEHRVNNDFRGPPKKQIITMLMFSLSTLFKKNQEDTISSLSKMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIESLIGSNWPIGYQVGSFAYSYLADNLYVSKSRLIPLGSPEEYALALQKGPSGGGVAAIVDELPYVELFLSKETDFGIIGQPFAKSSWGFVSGHLTRISK* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01674 782 Gene3D - 576 705 - -
Phac5g01674 782 PIRSF IGluLR_plant 1 775 IPR017103 -
Phac5g01674 782 SUPERFAMILY Periplasmic binding protein-like I 22 456 IPR028082 -
Phac5g01674 782 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 27 773 IPR015683 -
Phac5g01674 782 FunFam Glutamate receptor 576 714 - -
Phac5g01674 782 Pfam Bacterial extracellular solute-binding proteins, family 3 466 762 IPR001638 -
Phac5g01674 782 SUPERFAMILY Periplasmic binding protein-like II 443 773 - -
Phac5g01674 782 SMART GluR_14 466 782 IPR001320 GO:0015276|GO:0016020
Phac5g01674 782 Pfam Receptor family ligand binding region 44 402 IPR001828 -
Phac5g01674 782 Gene3D - 457 575 - -
Phac5g01674 782 FunFam Glutamate receptor 142 300 - -
Phac5g01674 782 Gene3D - 142 418 - -
Phac5g01674 782 FunFam Glutamate receptor 460 576 - -
Phac5g01674 782 CDD PBP1_GABAb_receptor_plant 28 422 IPR044440 -
Phac5g01674 782 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 40 56 - -
Phac5g01674 782 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 231 254 - -
Phac5g01674 782 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 100 128 - -
Phac5g01674 782 Pfam Ligand-gated ion channel 585 688 IPR001320 GO:0015276|GO:0016020
Phac5g01674 782 Gene3D - 45 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01674 Phac-Chr5 36943238 36949116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01674 23 772 Ion Channels AT2G32400 58.699 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01674 K05387 - gmx:100796389 1362.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01674 5 36943238 36949116 Phac5g01674 5 36943238 36949116 ECH