Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01673 ATGAAGAAATTCAAGGTTTTGCACCTTGTGACATGGATTTGGATATGTGGTGTTGCTCACAGCACAAGGCCTGCCAGTGTGAACATTGGTGCGGTTTTTGCTTTCAATTCGGTCATAGGTAGAGCTGCGAAGGAAGCTATGGAAATGGCCGTTTCTGATGTCAATGGGGACCCCACAGTTCTCAAGGGAACCAAACTCAACTTGATAATGAAGGATGCCATGTGCAATGCTTTTCTGGGAGCAATTGGAGCTTTTCAGTTACTTGAGAAAGGGGTTGCAGCCATAATTGGTCCCCAGTCATCTGCCGTAGCTCACACAGTTTCTCAAATTGCTGATGCTCTCCAAGTTCCTCTTGTTTCCTATGCTGCCACTGATCCAACCCTGTCCTCCCTTCAGTTTCCTTTCTTTATTCGATCTACGCAAAGCGACTTGGCACAAATGACCGCAATGGCTGATCTAATTGACTTTAATGGATGGAAAGAGGTCATTGTTGTATTCTTAGATGATGATTATGGAAGAAATGGAATATCTGCTTTGAGTGATGAACTTGAAAAGAGGAGATTGAAAATTTCTTATAAACTGCCTTTGAGTATTAAGTTTGATCTGGATGAAATCACCAACTTACTCAATCAATCCAAATTGTTTGGTCCTCGTGTTTATGTTGTTCATGTCAACCCTGATCCGAGATTGAGAATTTTTTCTGTTGCCCATAAACTTCAAATGATAGCCAAGGATTATGTCTGGCTTGTCACGGATTGGCTCTCAGCTACGATAGGTTCATTATCCCCAGTGAATCAGACCTCTTTCAGTGTTCTCCAAGGGGTCGTTGGTCTTCGTCAACACATTTTGGATTCCAGGAAAAAGAGAGCTTTCGTTTCTCGGTGGACAAAAATGCAAAGAGATGGATTGACAAATGCTAGTTTGAACTCCTATGGATTTTCTGCTTATGACACAGTTTGGGCAATTGCACTTTCAATTGATAAATTCATCAAAGTAAATAATTTTACCTTCATGCTTCATGATAAGTATAAGCTATCTCATACAGAAGGAATTGGCGTTCAGCTTGACAAACTCAAAATCTTCACTGGTGGATCTGATCTGGTCAAGATATTATTACAATCAAATTTTACTGGTGTGAGTGGTCAAGTTATGTTTAATTCTGATAGAAATATTGTAAGTGGTGGTTATGATATTATCAATGTCAATCAGTTGGGAATTACTAGGGTTGGTTTTTGGTCTAATTATACGGGATTTTCAGTTGTACCCCCTGAGACTCTTAAAAAAAGGGAACACAGCAGGTTTTCCAAAGATCAGAAGCTTGGCAACATTACTTGGCCAGGTGGAAAGACAGATCGACCACGTGGCTGGGTGATTGCTGATAATACCAAGCCACTGAGAATTGGAGTGCCAAAAAGAGCAAGTTTTGTTGAATTTGTAACTGAAGTGCCAAATAGTCATGAAATTCATGGGTATTGCATCGATGTGTTCAAGAAAGCCCTAGAATTTATCCCATATGAAGTTCCCTTTGTATTCAAGTCTTTCGGGAATGGTAAAGCAAATCCCAATTATGATGAACTTGTGAAAAGGGTTGCTGATAATGTATATGATGCTGTTGTTGGAGACATTGCAATTGTGACAAACCGTACAAGGATTGTTGATTTTTCTCAGCCTTTTGCATCATCTAGCCTCGTCATAGTGGCTCCTATCAACAAAGCAGGATCAAATGCTTGGGTCTTCCTCAAACCATTTACAGCAGATATGTGGTGTGCTACTGCTGCCTCATTTTTGGTGATTGGAATTGTTATATGGATTCTTGAGCACCGAGTCAACAATGACTTCCGTGGTCCTCCTAAGAAGCAAATTATAACAATGTTAATGTTCAGCCTCTCAACCCTGTTTAAGAAAAATCAGGAAGATACCATAAGCTCCCTTTCTAAAATGGTGATGATAGTCTGGCTTTTTCTATTGATGGTGATCACGGCTAGCTATACAGCTAGCTTGACTTCAATTCTTACAGTGGAGCAGCTTTCATCACCCATCACAGGAATTGAGAGCTTGATTGGAAGTAACTGGCCGATCGGATACCAAGTAGGGTCATTTGCTTACAGCTATCTGGCAGATAATCTTTATGTATCAAAATCAAGGCTTATTCCACTAGGCTCCCCCGAGGAATATGCTTTAGCACTGCAGAAGGGACCGTCTGGTGGAGGGGTGGCAGCTATCGTCGATGAGCTTCCGTATGTTGAGTTATTTCTGTCAAAAGAAACTGATTTTGGTATCATTGGACAGCCATTTGCAAAAAGCAGTTGGGGATTTGCTTTTCAAAGAGAATCTCCTTTTGCCTTTGACATGTCTACAGCAATTTTGAAACTTTCTGAGAATGGGGATCTTCATACGATACATGAGAAGTGGTTCTGTAAAATGGGCTGTCCTGAAGAAAGGACAAGCAACTCCAAGCCTGACCAGCTTCACTTGGTTAGCTTTTGGGGCCTGTATCTCTCATGTGGTGTTGTCTCTCTTGCTGCATTTTTTCTGTTTCTGCTGCAAATGATTCGGCAATACGCCCGCTTCAAACAAAAGCAAAAGGATATTGCTTCTTCGTCCTCAGAACAACCATCAGGCAGTCATTGTTCCCAGGTTGTTGTTAACTTCTTTAACTTCATTGATGAGAAGGAAGAGGCCATCAAGAAAATGTTCACCCCATCTGACAATCATCACAACCCCAACTGA 2730 0.411 MKKFKVLHLVTWIWICGVAHSTRPASVNIGAVFAFNSVIGRAAKEAMEMAVSDVNGDPTVLKGTKLNLIMKDAMCNAFLGAIGAFQLLEKGVAAIIGPQSSAVAHTVSQIADALQVPLVSYAATDPTLSSLQFPFFIRSTQSDLAQMTAMADLIDFNGWKEVIVVFLDDDYGRNGISALSDELEKRRLKISYKLPLSIKFDLDEITNLLNQSKLFGPRVYVVHVNPDPRLRIFSVAHKLQMIAKDYVWLVTDWLSATIGSLSPVNQTSFSVLQGVVGLRQHILDSRKKRAFVSRWTKMQRDGLTNASLNSYGFSAYDTVWAIALSIDKFIKVNNFTFMLHDKYKLSHTEGIGVQLDKLKIFTGGSDLVKILLQSNFTGVSGQVMFNSDRNIVSGGYDIINVNQLGITRVGFWSNYTGFSVVPPETLKKREHSRFSKDQKLGNITWPGGKTDRPRGWVIADNTKPLRIGVPKRASFVEFVTEVPNSHEIHGYCIDVFKKALEFIPYEVPFVFKSFGNGKANPNYDELVKRVADNVYDAVVGDIAIVTNRTRIVDFSQPFASSSLVIVAPINKAGSNAWVFLKPFTADMWCATAASFLVIGIVIWILEHRVNNDFRGPPKKQIITMLMFSLSTLFKKNQEDTISSLSKMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIESLIGSNWPIGYQVGSFAYSYLADNLYVSKSRLIPLGSPEEYALALQKGPSGGGVAAIVDELPYVELFLSKETDFGIIGQPFAKSSWGFAFQRESPFAFDMSTAILKLSENGDLHTIHEKWFCKMGCPEERTSNSKPDQLHLVSFWGLYLSCGVVSLAAFFLFLLQMIRQYARFKQKQKDIASSSSEQPSGSHCSQVVVNFFNFIDEKEEAIKKMFTPSDNHHNPN* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01673 909 PIRSF IGluLR_plant 1 909 IPR017103 -
Phac5g01673 909 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 27 863 IPR015683 -
Phac5g01673 909 SMART GluR_14 466 807 IPR001320 GO:0015276|GO:0016020
Phac5g01673 909 Gene3D - 753 812 - -
Phac5g01673 909 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 40 56 - -
Phac5g01673 909 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 100 128 - -
Phac5g01673 909 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 231 254 - -
Phac5g01673 909 SUPERFAMILY Periplasmic binding protein-like I 22 456 IPR028082 -
Phac5g01673 909 CDD GluR_Plant 463 805 - -
Phac5g01673 909 FunFam Glutamate receptor 460 576 - -
Phac5g01673 909 FunFam Glutamate receptor 142 300 - -
Phac5g01673 909 Gene3D - 142 418 - -
Phac5g01673 909 SUPERFAMILY Periplasmic binding protein-like II 443 805 - -
Phac5g01673 909 FunFam Glutamate receptor 702 809 - -
Phac5g01673 909 Gene3D - 576 704 - -
Phac5g01673 909 CDD PBP1_GABAb_receptor_plant 28 422 IPR044440 -
Phac5g01673 909 Gene3D - 457 575 - -
Phac5g01673 909 Pfam Receptor family ligand binding region 44 402 IPR001828 -
Phac5g01673 909 Pfam Ligand-gated ion channel 806 837 IPR001320 GO:0015276|GO:0016020
Phac5g01673 909 Pfam Bacterial extracellular solute-binding proteins, family 3 466 805 IPR001638 -
Phac5g01673 909 Gene3D - 45 393 - -
Phac5g01673 909 FunFam Glutamate receptor 576 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01673 Phac-Chr5 36943238 36949116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01673 23 907 Ion Channels AT2G32400 56.648 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01673 K05387 - gmx:100796389 1598.18