Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01662 ATGAATGACCTTCTCACTGATTCATTTGTTGGTGAGGCTAGTAATGGCCATCCTTCTAGAGAAAGTGACATTGAAATGGGACAGGTTCCGAGAAGCAACTCTGATATGGGAATGGAAGCTTTTAATAAGCAGATCCATGAGGCTGATAAACAGATCGATAAGCTGGCTGTGCTACTTCAAAAGTTAAAGGAAGCTAATGAGGAATCGAAAGCTGTTACAAAAGCATCTGCCATGAAAGGTATCAAGAAGAGGATGGAGAAAGATATTGATGAAGTTGGAAAGATTGCTCATGGTGTCAAAGCAAAGATAGAGGCTATAAACAGAGATAACCTATCCAATAGACAAAAGCCTGGCTGTGAGAAGGGAACAGGTATTGACAGAGCAAGAATGAATATGACAAATGCCTTGACTAAAAAATTCAAGGATCTCATGACAGAGTTCCAGACTCTTAGACAAAGAATACAAGATGAATATCGTGAGGTTGTGGAGAGAAGAGTTATAACAGTTACTGGGACTAGGCCAGATGATGAGACAATTGATCACCTGATAGAAACTGGAAACAGTGAGCAAATCTTCCAGAGAGCAATTCTAGAAGCCGGCCGAGGACAGGTAGTAAACACAGTAGAAGAAATTCAGGAGAGACATGATGCTGTGAAAGAGATTGAGAAAAAACTTCTTGATTTACACCAGATTTACCTTGACATGGCAGTCTTAGTTGATGCTCAAGGAGAAATTTTAGATAACATTGAAAGTCAGGTGACAAACGCGACTGATCATGTGAGACTGGGTAACGACGCTCTCCAAACTGCAAAAAGTCTGCAAAAGAAGTCAAGAAAATGCATGATGATTTCCATTATATTGCTCCTGGCCATCGCCCTCATCATCGTACTCGCTGTTGTGAAACCATGGAAGAAGTGA 918 0.4074 MNDLLTDSFVGEASNGHPSRESDIEMGQVPRSNSDMGMEAFNKQIHEADKQIDKLAVLLQKLKEANEESKAVTKASAMKGIKKRMEKDIDEVGKIAHGVKAKIEAINRDNLSNRQKPGCEKGTGIDRARMNMTNALTKKFKDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDHLIETGNSEQIFQRAILEAGRGQVVNTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVDAQGEILDNIESQVTNATDHVRLGNDALQTAKSLQKKSRKCMMISIILLLAIALIIVLAVVKPWKK* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01662 305 CDD SNARE_syntaxin1-like 207 269 - -
Phac5g01662 305 MobiDBLite consensus disorder prediction 1 15 - -
Phac5g01662 305 Pfam Syntaxin 41 243 IPR006011 GO:0016020
Phac5g01662 305 SMART SynN_4 33 159 IPR006011 GO:0016020
Phac5g01662 305 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 208 270 IPR000727 -
Phac5g01662 305 FunFam Syntaxin 132 201 301 - -
Phac5g01662 305 SUPERFAMILY t-snare proteins 35 263 IPR010989 GO:0016020|GO:0016192
Phac5g01662 305 PANTHER SYNTAXIN 37 289 IPR045242 -
Phac5g01662 305 Gene3D - 38 166 - -
Phac5g01662 305 CDD SynN 38 195 IPR006011 GO:0016020
Phac5g01662 305 SMART tSNARE_6 203 270 IPR000727 -
Phac5g01662 305 Coils Coil 38 75 - -
Phac5g01662 305 Pfam SNARE domain 244 296 IPR000727 -
Phac5g01662 305 MobiDBLite consensus disorder prediction 1 35 - -
Phac5g01662 305 FunFam Syntaxin 132 33 162 - -
Phac5g01662 305 Gene3D - 201 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01662 Phac-Chr5 36797537 36807391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01662 1 303 SNARE and Associated Proteins AT3G03800 60.726 6.96e-122 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01662 K08486 - gmx:100800991 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01662 5 36797537 36807391 Phac5g01662 5 36797537 36807391 ECH