Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01661 ATGGCTGACTCCAATACCTCTTCCACTCAAACTTCTTCACATTCTTCTGGGAAGCGTGGATCTTCCAAGGTTGAATTTTCTGAAGACGAGGAAACTCTTATCACCAGGATGTATAAACTGGTTGGGAAAAGGTGGTCTTTAATTGCTGGAAGAATTCCTGGAAGAACAGCAGAGGAAATAGAGAAGTATTGGACTTCGAAACTCTCGAGTTCTAGTAAATGA 222 0.4144 MADSNTSSTQTSSHSSGKRGSSKVEFSEDEETLITRMYKLVGKRWSLIAGRIPGRTAEEIEKYWTSKLSSSSK* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01661 73 CDD SANT 25 68 IPR001005 -
Phac5g01661 73 MobiDBLite consensus disorder prediction 1 20 - -
Phac5g01661 73 Pfam Myb-like DNA-binding domain 23 65 IPR001005 -
Phac5g01661 73 SUPERFAMILY Homeodomain-like 23 68 IPR009057 -
Phac5g01661 73 Gene3D - 25 73 - -
Phac5g01661 73 ProSiteProfiles Myb-like domain profile. 18 68 IPR001005 -
Phac5g01661 73 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 72 IPR017930 -
Phac5g01661 73 FunFam MYB-like transcription factor 25 67 - -
Phac5g01661 73 SMART sant 22 70 IPR001005 -
Phac5g01661 73 MobiDBLite consensus disorder prediction 1 28 - -
Phac5g01661 73 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 18 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01661 Phac-Chr5 36795721 36797139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01661 18 69 MYB Transcription Factor Family AT5G14750 53.846 4.91e-16 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac5g01661 Myb_DNA-binding 3.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01661 - - gmx:778180 115.546