Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01652 ATGGAACCCATTTGCCCTATTGGGTTGCTGCGTGCCTCTGAAATCTCTGCTCTCCTCTCTCCTCCATCACCACTTCAAATACAGGAATATTATGACAACCTTTTGGCTTCAAGAGGGTGCACTGGTATCTCAGTCAAACAGGATGGCAACTTTGGAAAAGGTGTTTATGCAGACATGGACTTCAAAGAGGGAGAACTTGTTCTGAAGGATCCCATGTTCGTAGGGGTTCAACATTCCCTCAACAAGATTGATTGTTTGGTCTGTAGTTTCTGCTTTCGTTTTATTGGCTCCATTGAACTTCAAATAGGAAGGAGGCTTTACATGAACCAACTAAGGGCCTATGAAAGTCATGGATGTGATGTCGGAAACTCTTCACAACACTTTCATGGAATGGATTCGTCTGATGAAGAAGAGAACACTCAGCAATGTACTTCTGGGATTTCCAAAACTAAGGTTCCTCTCCCTGAAGGTGTTGTGGAATCATTAATGAATGGTAAATTGGTGTTGCCTTGCTCCGAGAAGTTCTCCTTGTTGCCAGCTGTGCCATGCCCTGGTGGATGTGGAGAAGCTTACTATTGCAGCATGTCATGTGCAGAGGCTGATTGGGAATCCTCTCATTTGCTACTCTGTACTGGTGAGAGTTCTGATCCAGCTCGTAGAGAGGCACTCCTTAAATTCATCAAACATGCTAATGAAACAAATGACATATTCATCCTTGCTGCCAAGGCTATTTCTTCGACCATATTAAGGTATCGCAAGTTAAAAGCAGTCAGTCTTGAAAATCAAGTGAAACATGATACATCCTGTTCTTCAAACGACCGAAGTTTATCTTTTCTCTTGGAAGCTTGGAGGCCTATATCGATGGGACACAAGAAAAGGTGGTGGGACTGTATTGCTTTGCCAGATGATGTGGATTCGTCTGACGAACCTTCATTCAGGCTGCAAATCAAAGAGTTGGCATTTGAGTCTCTGCAACTTCTTAAGGCAGCCATATTTGACAAGGAATGTGAGCCATTATTCTCCCTTGAAATCTATGGGCATATCATCGGCATGTTTGAGCTGAATAATCTTGATTTGGTTGTGGCTTCTCCGGTGGAGGATTACTTTTTATACATTGATGATCTGACACATCCTAACAAGGAAGAGGCTGAGAAAATTACACAACCGATTCTGGATGCACTTGGTGAAGACTATTCTATTTGTTGCGAAGGGACTGCATTTTTTCCTTTGCAAAGCTGCATGAACCATTCTTGTTGTCCTAATGCCAAAGCTTTCAAAAGAGATGAGGATAAAGATGGTCAAGCAACAATAATTGCACAGAGGTCCATTTGTAAAGGAGAAGAGATAACCATATCATATGTTGATGAGGACCTTCCATTTGAAGAGAGGCAGGCATCCCTTGCAGATTATGGTTTCAGATGCAGGTGTCCAAAGTGCATTGAAGAAGAGTCATAA 1455 0.4247 MEPICPIGLLRASEISALLSPPSPLQIQEYYDNLLASRGCTGISVKQDGNFGKGVYADMDFKEGELVLKDPMFVGVQHSLNKIDCLVCSFCFRFIGSIELQIGRRLYMNQLRAYESHGCDVGNSSQHFHGMDSSDEEENTQQCTSGISKTKVPLPEGVVESLMNGKLVLPCSEKFSLLPAVPCPGGCGEAYYCSMSCAEADWESSHLLLCTGESSDPARREALLKFIKHANETNDIFILAAKAISSTILRYRKLKAVSLENQVKHDTSCSSNDRSLSFLLEAWRPISMGHKKRWWDCIALPDDVDSSDEPSFRLQIKELAFESLQLLKAAIFDKECEPLFSLEIYGHIIGMFELNNLDLVVASPVEDYFLYIDDLTHPNKEEAEKITQPILDALGEDYSICCEGTAFFPLQSCMNHSCCPNAKAFKRDEDKDGQATIIAQRSICKGEEITISYVDEDLPFEERQASLADYGFRCRCPKCIEEES* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01652 484 CDD SET_SMYD 393 479 - -
Phac5g01652 484 Gene3D SET domain 373 484 IPR046341 -
Phac5g01652 484 SUPERFAMILY HIT/MYND zinc finger-like 179 211 - -
Phac5g01652 484 Pfam SET domain 52 453 IPR001214 GO:0005515
Phac5g01652 484 SUPERFAMILY SET domain 41 479 IPR046341 -
Phac5g01652 484 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 483 IPR044237 GO:0008168
Phac5g01652 484 ProSiteProfiles SET domain profile. 41 454 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01652 Phac-Chr5 36741379 36747221 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac5g01652 SET 4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01652 - - gmx:100803651 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01652 5 36741379 36747221 Phac5g01652 5 36741379 36747221 ECH