Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01646 ATGGAACCTCTGTGTGAGTTTTGTTGGGCTGTGAGAGCTGTGGTTTACTGCAAGGCAGATTCTGCTCGTCTCTGCTTGCATTGCGATGGCTGTGTACACACTGCAAATTCTTTGTCTCGGAGGCATTCGCGTTCCCTCCTTTGCGATAACTGCAATTCCCAGCCAGCAATGATACGTTGCATGGATCATAAGTTGTCTTCGTGTCAAGGTTGTGACTGGAACCCGAATGATTGTTCTGCATTGGGACATAGGCGCCTCACGTTGAATTCTTACACTGGTTCTCCTTCTTTGGCTGAGTTTTCTAGGATCTGGTCCTTTGTGTTTGATGTTAATTCCTCCCTTGGTGGTTGGGAATTGGTTAGTACTTTGCCAAAAAGTGAGAGCTGCACTAGCCAGTGTTTGGAGCAACCTGATCACAATGGTGGTTCCTTTGGTTTGATGAGTGAGAAGTTGGATGAAATTGAATCTTGTGTCAGATATGAACCTTGGATGGGGCAATGTCACACCATTCCCTCAAATCCAAATTACACACCCTTCTGCAAGGAAGAAGCATTTTTCCTTCCTCGAGACTCAAACCAGCCAAAGCCGCAGGAATGTACTGATCTAGGAACTCGTGATGGGAATGGAATCTGTGAAGGTCTGAATGTGGACAGTGCTCCAATAAATTTTGAAAGTGCTGATGAAATATTTGGCTGTTCACAAGCTGCCACAAGATACCCCCTTGAAGATGGAGGAATGGACTGTCTATTGATGGATAAAAACATATCAGTCACCGAATCTAGTTCACTTATTGAGAGTGCCTTAGAGTCATCCGGGGCTGGTGGATCAGTTAGTGTGATGCAGGTCATGAACAGTAATACAAATTGTGCACTTATGAATCCTAGCAGCACTAGAAACATCAGTCTGGGATTTCCTCAGGGTCAAGTTCATTCAAGCATACCTCTTCAATTAGGCAACATTGTGGGTGAAAATAGTTCTACTGAATATCAAGACGGGGGTATATCGCCAATGTTTCTGCCGGGTGAATTCCCCTGGGAATCAAATTTGGAGGGTACATGCCCACAGGCAAGGGATAAAGCTAAAATGAGATACAATGAAAAAAAGAAAACTCGAACGTTTGGTAAGCAAATAAGATATGCATCTCGCAAAGCGAGGGCTGATACAAGAAAACGTGTGAAAGGTAGATTTGTTAAAGCAGGTGAAGCATATGATTATGACCCTCTTGTGACAAGGGACGTCTAA 1242 0.4404 MEPLCEFCWAVRAVVYCKADSARLCLHCDGCVHTANSLSRRHSRSLLCDNCNSQPAMIRCMDHKLSSCQGCDWNPNDCSALGHRRLTLNSYTGSPSLAEFSRIWSFVFDVNSSLGGWELVSTLPKSESCTSQCLEQPDHNGGSFGLMSEKLDEIESCVRYEPWMGQCHTIPSNPNYTPFCKEEAFFLPRDSNQPKPQECTDLGTRDGNGICEGLNVDSAPINFESADEIFGCSQAATRYPLEDGGMDCLLMDKNISVTESSSLIESALESSGAGGSVSVMQVMNSNTNCALMNPSSTRNISLGFPQGQVHSSIPLQLGNIVGENSSTEYQDGGISPMFLPGEFPWESNLEGTCPQARDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLVTRDV* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01646 413 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 402 - -
Phac5g01646 413 CDD Bbox1_BBX-like 4 47 - -
Phac5g01646 413 SMART bboxneu5 1 47 IPR000315 GO:0008270
Phac5g01646 413 Pfam CCT motif 357 399 IPR010402 GO:0005515
Phac5g01646 413 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Phac5g01646 413 ProSiteProfiles CCT domain profile. 357 399 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01646 Phac-Chr5 36716566 36721026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01646 1 407 C2C2-CO-like Transcription Factor Family AT3G21880 44.146 5.10e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac5g01646 CCT 1.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01646 - - vra:106761521 715.687