Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01644 ATGGAACCTCTGTGTGAGTTTTGTTGGGCTGTGAGAGCTGTGGTTTACTGCAAGGCAGATTCTGCTCGTCTCTGCTTGCATTGCGATGGCTGTGTACACACTGCAAATTCTTTGTCTCGGAGGCATTCGCGTTCCCTCCTTTGCGATAACTGCAATTCCCAGCCAGCAATGATACGTTGCATGGATCATAAGTTGTCTTCGTGTCAAGGTTGTGACTGGAACCCGAATGATTGTTCTGCATTGGGACATAGGCGCCTCACGTTGAATTCTTACACTGGTTCTCCTTCTTTGGCTGAGTTTTCTAGGATCTGGTCCTTTGTGTTTGATGTTAATTCCTCCCTTGGTGGTTGGGAATTGGTTAGTACTTTGCCAAAAAGTGAGAGCTGCACTAGCCAGTGTTTGGAGCAACCTGATCACAATGGTGGTTCCTTTGGTTTGATGAGTGAGAAGTTGGATGAAATTGAATCTTGTGTCAGATATGAACCTTGGATGGGGCAATGTCACACCATTCCCTCAAATCCAAATTACACACCCTTCTGCAAGGAAGAAGCATTTTTCCTTCCTCGAGACTCAAACCAGCCAAAGCCGCAGGAATGTACTGATCTAGGAACTCGTGATGGGAATGGAATCTGTGAAGGTCTGAATGTGGACAGTGCTCCAATAAATTTTGAAAGTGCTGATGAAATATTTGGCTGTTCACAAGCTGCCACAAGATACCCCCTTGAAGATGGAGGAATGGACTGTCTATTGATGGATAAAAACATATCAGTCACCGAATCTAGTTCACTTATTGAGAGTGCCTTAGAGGCATCATCATCAATTCAACAAGATTGTGTGGCTTTTCAGTCATCCGGGGCTGGTGGATCAGTTAGTGTGATGCAGGTCATGAACAGTAATACAAATTGTGCACTTATGAATCCTAGCAGCACTAGAAACATCAGTCTGGGATTTCCTCAGGGTCAAGTTCATTCAAGCATACCTCTTCAATTAGGCAACATTGTGGGTGAAAATAGTTCTACTGAATATCAAGACGGGGGTATATCGCCAATGTTTCTGCCGGGTGAATTCCCCTGGGAATCAAATTTGGAGGGTACATGCCCACAGGCAAGGGATAAAGCTAAAATGAGATACAATGAAAAAAAGAAAACTCGAACGTTTGGTAAGCAAATAAGATATGCATCTCGCAAAGCGAGGGCTGATACAAGAAAACGTGTGAAAGGTAGATTTGTTAAAGCAGGTGAAGCATATGATTATGACCCTCTTGTGACAAGGGACGTCTAA 1281 0.4387 MEPLCEFCWAVRAVVYCKADSARLCLHCDGCVHTANSLSRRHSRSLLCDNCNSQPAMIRCMDHKLSSCQGCDWNPNDCSALGHRRLTLNSYTGSPSLAEFSRIWSFVFDVNSSLGGWELVSTLPKSESCTSQCLEQPDHNGGSFGLMSEKLDEIESCVRYEPWMGQCHTIPSNPNYTPFCKEEAFFLPRDSNQPKPQECTDLGTRDGNGICEGLNVDSAPINFESADEIFGCSQAATRYPLEDGGMDCLLMDKNISVTESSSLIESALEASSSIQQDCVAFQSSGAGGSVSVMQVMNSNTNCALMNPSSTRNISLGFPQGQVHSSIPLQLGNIVGENSSTEYQDGGISPMFLPGEFPWESNLEGTCPQARDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLVTRDV* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01644 426 CDD Bbox1_BBX-like 4 47 - -
Phac5g01644 426 ProSiteProfiles CCT domain profile. 370 412 IPR010402 GO:0005515
Phac5g01644 426 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 415 - -
Phac5g01644 426 SMART bboxneu5 1 47 IPR000315 GO:0008270
Phac5g01644 426 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Phac5g01644 426 Pfam CCT motif 370 412 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01644 Phac-Chr5 36716566 36721026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01644 1 420 C2C2-CO-like Transcription Factor Family AT3G21880 43.026 3.24e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac5g01644 CCT 1.4e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01644 - - vra:106761521 762.296