Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01643 ATGGAACCTCTGTGTGAGTTTTGTTGGGCTGTGAGAGCTGTGGTTTACTGCAAGGCAGATTCTGCTCGTCTCTGCTTGCATTGCGATGGCTGTGTACACACTGCAAATTCTTTGTCTCGGAGGCATTCGCGTTCCCTCCTTTGCGATAACTGCAATTCCCAGCCAGCAATGATACGTTGCATGGATCATAAGTTGTCTTCGTGTCAAGGTTGTGACTGGAACCCGAATGATTGTTCTGCATTGGGACATAGGCGCCTCACGTTGAATTCTTACACTGGTTCTCCTTCTTTGGCTGAGTTTTCTAGGATCTGGTCCTTTGTGTTTGATGTTAATTCCTCCCTTGGTGGTTGGGAATTGGTTAGTACTTTGCCAAAAAGTGAGAGCTGCACTAGCCAGTGTTTGGAGCAACCTGATCACAATGGTGGTTCCTTTGGTTTGATGAGTGAGAAGTTGGATGAAATTGAATCTTGTGTCAGATATGAACCTTGGATGGGGCAATGTCACACCATTCCCTCAAATCCAAATTACACACCCTTCTGCAAGGAAGAAGCATTTTTCCTTCCTCGAGACTCAAACCAGCCAAAGCCGCAGGAATGTACTGATCTAGGAACTCGTGATGGGAATGGAATCTGTGAAGGTCTGAATGTGGACAGTGCTCCAATAAATTTTGAAAGTGCTGATGAAATATTTGGCTGTTCACAAGCTGCCACAAGATACCCCCTTGAAGATGGAGGAATGGACTGTCTATTGATGGATAAAAACATATCAGTCACCGAATCTAGTTCACTTATTGAGAGTGCCTTAGAGGCATCATCATCAATTCAACAAGATTGTGTGGCTTTTCAGTCATCCGGGGCTGGTGGATCAGTTAGTGTGATGCAGGTCATGAACAGTAATACAAATTGTGCACTTATGAATCCTAGCAGCACTAGAAACATCAGTCTGGGATTTCCTCAGGGTCAAGTTCATTCAAGCATACCTCTTCAATTAGGCAACATTGTGGGTGAAAATAGTTCTACTGAATATCAAGACGGGGGTATATCGCCAATGTTTCTGCCGGGTGAATTCCCCTGGGAATCAAATTTGGAGGGTACATGCCCACAGGCAAGGGATAAAGCTAAAATGAGATACAATGAAAAAAAGAAAACTCGAACGTACGCACCTTTAATTCTCTACATATTTTATGGTTTGGTAAGCAAATAA 1203 0.4364 MEPLCEFCWAVRAVVYCKADSARLCLHCDGCVHTANSLSRRHSRSLLCDNCNSQPAMIRCMDHKLSSCQGCDWNPNDCSALGHRRLTLNSYTGSPSLAEFSRIWSFVFDVNSSLGGWELVSTLPKSESCTSQCLEQPDHNGGSFGLMSEKLDEIESCVRYEPWMGQCHTIPSNPNYTPFCKEEAFFLPRDSNQPKPQECTDLGTRDGNGICEGLNVDSAPINFESADEIFGCSQAATRYPLEDGGMDCLLMDKNISVTESSSLIESALEASSSIQQDCVAFQSSGAGGSVSVMQVMNSNTNCALMNPSSTRNISLGFPQGQVHSSIPLQLGNIVGENSSTEYQDGGISPMFLPGEFPWESNLEGTCPQARDKAKMRYNEKKKTRTYAPLILYIFYGLVSK* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01643 400 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 386 - -
Phac5g01643 400 CDD Bbox1_BBX-like 4 47 - -
Phac5g01643 400 SMART bboxneu5 1 47 IPR000315 GO:0008270
Phac5g01643 400 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01643 Phac-Chr5 36716566 36721026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01643 1 392 C2C2-CO-like Transcription Factor Family AT3G21880 38.228 4.70e-73 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01643 - - vra:106761521 686.411