Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01642 ATGTGCAAGGGTGCAGAAGGACAAAAGAAACATGGTTTCTGCAGCAGCTTCCTACATGAAGAGAGAGATACAAGAAGTGGTAAATGTTGCGAGCTGTGTGGATTACAGGCTTCATTGTATTGTCAAGCTGATGATGCATACTTGTGTAGAAAATGTGATACAAGGGTTCATGGAGCTAACTTTTTGGCCCTTAGGCACATTAGGTGCTTTCTGTGCAACACATGTCACAACCTTACGCGAAGATATCTCATTGGAGAATCACTAGAGGTGGTTCTTCCACCCAACATAAACTGGGTCATAGGAAATCTTCCTAACAACAGAATAACCTACGGAAAGTGTTCAAGAATGCATAACAACCCTTCCCTCTTGTTTTAA 375 0.4187 MCKGAEGQKKHGFCSSFLHEERDTRSGKCCELCGLQASLYCQADDAYLCRKCDTRVHGANFLALRHIRCFLCNTCHNLTRRYLIGESLEVVLPPNINWVIGNLPNNRITYGKCSRMHNNPSLLF* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01642 124 CDD Bbox1_BBX-like 29 71 - -
Phac5g01642 124 SMART bboxneu5 25 71 IPR000315 GO:0008270
Phac5g01642 124 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 29 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01642 Phac-Chr5 36714687 36715647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01642 30 107 C2C2-CO-like Transcription Factor Family AT3G21890 52.564 2.99e-22 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac5g01642 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01642 - - pvu:PHAVU_005G113200g 266.159