Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01632 ATGGACATGAATTCCTCAGGTGCTGCCTCCGGTTGGCTTTATGATTATGGCTTTGATATCCCTGTTGCTGGTGCTGACTTCATGGCTGCAGCAGACTCTGGAGGTTTCAGTTGGGGCCCTCAAAATCACACCTTAAAGGCTCCTTCAAATACAAGCTTGGAAATGGAATACTCACTGGATTCAACTGTTCTGGAAAATGGTCCTTCAAAGCGGTTAAGGACTGAGTCATGTGCATCTGGCGCCAAGGCATGTCGCGAAAAATTGCGAAGGGATAAACTGAATGAGAGGTTTCTGGAATTGAGTTCCATCTTGGAGCCTGGTAGGCCGCCCAAAACAGACAAAGTTGCAATATTAAGTGATGCTGTTCGAGCGGTAGTCCAATTGAGAAATGAAGCCGAGAGGCTTAAGGAAATGAACGATGAATTACAGGGAAAGGTTAAAGAATTGAAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGAATATGCTGAAGGAAGAGAAAGAAAAGTTGGAGCAACAGGTAAAACTGACAAATGTTATACAGCACAGCTTCCTGCCTCAAGCCCCAGCTGCTAAAGAACAAGTTGGTAGCCACAAGCTGATACCTTTCATTGGCTATCCTGGAATTGCTATGTGGCAGTTTATGCCCCCTGCTGCAGTTGATACATCGAAGGATCATCTGCTTCGACCTCCAGTGGCATAA 702 0.4558 MDMNSSGAASGWLYDYGFDIPVAGADFMAAADSGGFSWGPQNHTLKAPSNTSLEMEYSLDSTVLENGPSKRLRTESCASGAKACREKLRRDKLNERFLELSSILEPGRPPKTDKVAILSDAVRAVVQLRNEAERLKEMNDELQGKVKELKAEKNELRDEKNMLKEEKEKLEQQVKLTNVIQHSFLPQAPAAKEQVGSHKLIPFIGYPGIAMWQFMPPAAVDTSKDHLLRPPVA* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01632 233 Gene3D arf6 gtpase in complex with a specific effector, jip4 127 179 - -
Phac5g01632 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 128 IPR011598 GO:0046983
Phac5g01632 233 PANTHER BHLH TRANSCRIPTION FACTOR 2 233 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Phac5g01632 233 Gene3D - 71 126 IPR036638 GO:0046983
Phac5g01632 233 Pfam Helix-loop-helix DNA-binding domain 81 126 IPR011598 GO:0046983
Phac5g01632 233 SMART finulus 83 134 IPR011598 GO:0046983
Phac5g01632 233 CDD bHLH_AtILR3_like 82 157 - -
Phac5g01632 233 Coils Coil 118 180 - -
Phac5g01632 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 83 152 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01632 Phac-Chr5 36631915 36638079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01632 10 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 53.191 6.92e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac5g01632 HLH 8.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01632 - - gmx:100806838 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01632 5 36631915 36638079 Phac5g01632 5 36631915 36638079 ECH