Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01624 ATGATAATGTATCCCGGCGACGGCTCCTCCTTGGACCCCATGTTTTCCGGCACCAGTTTACAGTCACTTCTCTCTCTCAACCCTTCCATCTTGGAAGATGGCTTTCCCACCTTGGCTTCCCTAACTGATGACCCTAGCTTAATACCGCAACCTTCAGAAGTTCCAAAGCTTCTCGTTCCCAAAACCGAACCCTCACAACCCTTCAAATTCTTCCCCCAATATCATCCCACTCCCTTCCTCCGTCTTCCCCAGCTCCGCTCCCCGGACCAGCCTCAGCCAAAACGCCAACGGATGGAGTCTCCGCTGATCCCGCAGAGTAACCTGGCTCGCCAACGCAGACAGAAGCTGAGCGAGAAAACGCGGTACCTGCAGAAACTGATGCCATGGGACAAGAAAATGGATCAAGGGACGCTTCTGGAGGAAGCCTACAAATACGTGAGGTTCCTTCAGGCGCAGTTCCGCGTGCTACAGTCCATGCCCTCCCACTCCTCCTCTTCCTCCTCCTCCTTCCGACAAAATACCGCCGCCGTATTCGTAGATCTGGAGAAGCTGAACCGATCACAACTCCTCCAGGTGCTGGTTAACTCCCCCGTGGCTCAAACAATGCTTTATTCTCAGGGCTTTTGTGTCTTCTCTCTGGAACAGTTATCACTGCTGAGACAATTATCCGACAGAAAACAGCAGCACCATGATTCTGCTTTCTCCAAATCTGTTTTCAACTAA 723 0.5201 MIMYPGDGSSLDPMFSGTSLQSLLSLNPSILEDGFPTLASLTDDPSLIPQPSEVPKLLVPKTEPSQPFKFFPQYHPTPFLRLPQLRSPDQPQPKRQRMESPLIPQSNLARQRRQKLSEKTRYLQKLMPWDKKMDQGTLLEEAYKYVRFLQAQFRVLQSMPSHSSSSSSSFRQNTAAVFVDLEKLNRSQLLQVLVNSPVAQTMLYSQGFCVFSLEQLSLLRQLSDRKQQHHDSAFSKSVFN* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01624 240 SMART finulus 106 155 IPR011598 GO:0046983
Phac5g01624 240 MobiDBLite consensus disorder prediction 81 114 - -
Phac5g01624 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 110 162 IPR036638 GO:0046983
Phac5g01624 240 Gene3D - 104 172 IPR036638 GO:0046983
Phac5g01624 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 100 149 IPR011598 GO:0046983
Phac5g01624 240 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 91 218 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01624 Phac-Chr5 36556959 36557900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01624 78 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 36.628 5.55e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac5g01624 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01624 - - aprc:113855910 275.018