Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01621 ATGCAAGTCACGTCCTCACATAGCCACATGAAAGCTGAGCTGAAGGGCACGTCCATTTCCTTTCAAAACCCTACTACTCTCTTTAACACACCTCACAACCCTCTCTCGGGAGCACTCAAAGGGTGTCTCGGAAGCCTCGATGGAGCTTGTATTGAGAAGCTCTTGCTCCACTGTGCCAGCGCTTTGGAGAGCAACGACATCACCTTGGCTCAACAGGTCATGTGGGTGCTCAACAACGTTGCTTCCCCTGTGGGGGACACCAACCAAAGGCTCACCTCGTGGTTTCTAAGGGCATTAATCTCTAGGGCTTCAAGAATTTGCCCTACTGCCATGAGTTTCAAAGGAAGCAACACCATTCAAAGGAGGCTGATGAGCGTGACAGAGCTAGCCGGGTATGTGGATCTCATTCCTTGGCATAGATTTGGGTATTGTGCATCCAATAATGAAATTTACAAAGCAATAACGGGGTACCAAAGGGTACATGTTCTAGATTTTAGTATAACCCATTGTATGCAATGGCCTACTTTTATAGATGGATTAGCGAAAAGGCCTGAAGGACCTCCTTCACTTAGAATCACGGTTCCATTTTGTAGACCACATGTACCCCCCTTGGTCAATGTATCAATACATGAGGTTGGTTTACGCTTAGGGAATTTCGCCAAGTTCAGAGATGTCCCTTTTGAATTCAATGTTATAGGAAACACAGGACCTTTAACACCTGCGGAATTGAGCGATGAATCAACTAGCTTTCATTTTGAAGCAATGTTAAGTCTCTTGAATCCTGCTACTCTAAATCTCAGGGAAGATGAAGCCTTGGTCATAAATTGCCAAAATTGGCTACGCTATTTGTCTGATGATAGAAAGGGAAGCCGCCAAAGTCTTTCACTTAGGGATGCCTTTCTGAATCTAATAAAAGGTCTTAACCCCCGGATTGTTCTCTTGGTTGACGAGGATTGTGATCTTAGTGTATCTAGTCTAACATCAAGAATCACCACATGTTTCAACCATCTTTGGATACCCTTTGACGCATTGGAGACCTTTTTGCCTAAAGATAGTGGTCAGAGGACAGAGTTTGAATCCGACATAGGCCAGAAGATTGAGAACATCATAAGCTTTGAAGGGCACCAAAGAATAGAGAGGTTGGAGTGTGGGGTGCAAATGTCCCAAAGAATGAAAAATGTGGGATACCTCAGTGTTCCATTTTGTGATGAAACTGTTAGGGAAGTTAAAGGTTTGCTAGATGAGCATGCTAGTGGGTGGGGGATGAAAAGAGAAGAAGGTATGCTAGTTCTCACATGGAAAGGAAACAGCTGTGTCTTTGCGACAGCTTGGGTCCCCTGTGAAATGAGGGATCATATTGGAATGGATGCAAGTCTGCCTTAA 1383 0.4447 MQVTSSHSHMKAELKGTSISFQNPTTLFNTPHNPLSGALKGCLGSLDGACIEKLLLHCASALESNDITLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRASRICPTAMSFKGSNTIQRRLMSVTELAGYVDLIPWHRFGYCASNNEIYKAITGYQRVHVLDFSITHCMQWPTFIDGLAKRPEGPPSLRITVPFCRPHVPPLVNVSIHEVGLRLGNFAKFRDVPFEFNVIGNTGPLTPAELSDESTSFHFEAMLSLLNPATLNLREDEALVINCQNWLRYLSDDRKGSRQSLSLRDAFLNLIKGLNPRIVLLVDEDCDLSVSSLTSRITTCFNHLWIPFDALETFLPKDSGQRTEFESDIGQKIENIISFEGHQRIERLECGVQMSQRMKNVGYLSVPFCDETVREVKGLLDEHASGWGMKREEGMLVLTWKGNSCVFATAWVPCEMRDHIGMDASLP* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01621 460 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 51 434 IPR005202 -
Phac5g01621 460 ProSiteProfiles GRAS family profile. 42 445 IPR005202 -
Phac5g01621 460 Pfam GRAS domain family 52 444 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01621 Phac-Chr5 36508332 36510641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01621 25 447 GRAS Transcription Factor Family AT3G49950 44.213 1.10e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac5g01621 GRAS 1.2e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01621 - - gmx:100802093 874.389