Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01613 ATGCACATGTTAGCGAAAGCACATAGTAAAGGGGATGGAAGCAAGTCCCTGGCTAAGATACTGGCGAAATGGAAAGAATATAACGCCCAGCTTGATTCCTGCAAAGATGCGGATAAGCCAGTTCGCAAAGTTCCTGCCAAGGGATCGAAAAAAGGGTGTATGAAAGGTAAAGGGGGGCCTGAGAACTCGCGGTGTAACTACAGAGGTGTTAGGCAGAGGACTTGGGGAAAGTGGGTTGCTGAAATCCGAGAGCCGAACAGAGGGAACAGGCTGTGGCTAGGTACTTTTCCCACTGCCATTGGAGCTGCCCTTGCATATGATGAAGCAGCGAGGGCAATGTATGGATCCTGTGCCCGTCTCAACTTTCCCAATGTTTCAGTTTCCAGTTTCTCTGAGGAATCCTCCAAAGATTCTCCAGTGGCGAATCATTCTGGTTCCTCAATGGCAGTGTCTGCAAATGAATCCATGGTTTCCCCAAGTAACTCTGAGGGGGGAGGCGAAGAAGAAGAAGAGGATGTTGATATGGAGCCCATTTCCTTATCCTTAAGTGTAAAACATGAGAACGGGGAAGGTGAATCAGGGATAAGTTCATCCCCTCCTTCTTCTTCATAG 612 0.4837 MHMLAKAHSKGDGSKSLAKILAKWKEYNAQLDSCKDADKPVRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMYGSCARLNFPNVSVSSFSEESSKDSPVANHSGSSMAVSANESMVSPSNSEGGGEEEEEDVDMEPISLSLSVKHENGEGESGISSSPPSSS* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01613 203 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Phac5g01613 203 MobiDBLite consensus disorder prediction 129 162 - -
Phac5g01613 203 Gene3D AP2/ERF domain 66 125 IPR036955 GO:0003700|GO:0006355
Phac5g01613 203 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 5 174 - -
Phac5g01613 203 SUPERFAMILY DNA-binding domain 66 123 IPR016177 GO:0003677
Phac5g01613 203 FunFam Ethylene-responsive transcription factor 2 65 124 - -
Phac5g01613 203 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Phac5g01613 203 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Phac5g01613 203 CDD AP2 65 124 IPR001471 GO:0003700|GO:0006355
Phac5g01613 203 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Phac5g01613 203 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Phac5g01613 203 MobiDBLite consensus disorder prediction 39 61 - -
Phac5g01613 203 MobiDBLite consensus disorder prediction 129 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01613 Phac-Chr5 36314128 36315978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01613 10 187 AP2-EREBP Transcription Factor Family AT2G40340 50.267 1.47e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac5g01613 AP2 3.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01613 - K09286 gmx:100499747 342.813