Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01608 ATGAATAATTTCTCAAATCCAATTAAAAACAATCTTTCAATATACCTTTACCACTCACATGACAATGAGTCCAAGCTCAAAATTCTCATGATGTATGGATTTTTTTTTAAGGGAACGTTTTCTGGAGGTCATGATATAGCTGTAAAGAGACTTTCAAATGTTTCCACTCAAGGTTTACAGGAATTTCAAAATGAGGTTATTCTGATTGCTAAACTTCAACACCGGAACCTTGTTAGACTAAGGGGCTACTGCATAAAAGGAGATGAAAAAATCTTACTTTATGAATACATGCCAAACAAGAGCTTGGACTCATTTATATTTGACCGGAGTCGAACTATACTCTTGGATTGGCCAATGCGGTTTGAGATAATTGTAGGCATTGCTCGAGGCATGCTCTACCTTCACCAAGACTCCAGATTGAGAGTGATTCATAGAGATTTAAAAACTAGCAACATTCTTCTAGATGAGGAGATGAATCCAAAGATATCAGACTTTGGACTTGCCAAAATATTTGGGGGGAAAGAAATTGAAGCAAGTACAGAGAGAGTTGTGGGAACCTATGGGTATATGGCTCCAGAGTATGCATTGGATGGACTTTTTTCAGTCAAATCTGATGTTTTCAGCTTTGGAGTGGTCCTTCTAGAAATCCTCAGTGGAAAAAGGAACACAGGGTTTTATGAATCCAAACAAATTTCTAGCCTTTTGGGTTTTGCATGGAAGTTATGGACAGAGAATAAGCTGCTGGATTTAATGGATTCATGCCTTGGTGAAACATGCAACCAAAATCAATTCATTAAGTGTGCAATTATTGGGCTATTATGCATCCAAGATGAACCAATTGATCGACCCACTATGTCAAATGTTTTGTACATGCTTGATAGAGAGACAGCAAGCATGCCATTGCCCATTCCCACACAACCAACCTTTTTTGTGAACAAGCGTTTTTCCGGCTCAGCTTCCTCTTCTAGCAAACCAGAGACAAATCTGCAATTTGAGAGCAGTTATCAAGAAGGTCGATAG 1020 0.3843 MNNFSNPIKNNLSIYLYHSHDNESKLKILMMYGFFFKGTFSGGHDIAVKRLSNVSTQGLQEFQNEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRSRTILLDWPMRFEIIVGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIFGGKEIEASTERVVGTYGYMAPEYALDGLFSVKSDVFSFGVVLLEILSGKRNTGFYESKQISSLLGFAWKLWTENKLLDLMDSCLGETCNQNQFIKCAIIGLLCIQDEPIDRPTMSNVLYMLDRETASMPLPIPTQPTFFVNKRFSGSASSSSKPETNLQFESSYQEGR* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01608 339 CDD STKc_IRAK 31 294 - -
Phac5g01608 339 SMART serkin_6 26 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01608 339 Gene3D Phosphorylase Kinase; domain 1 18 96 - -
Phac5g01608 339 MobiDBLite consensus disorder prediction 316 339 - -
Phac5g01608 339 Gene3D Transferase(Phosphotransferase) domain 1 97 300 - -
Phac5g01608 339 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 326 - -
Phac5g01608 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Phac5g01608 339 ProSiteProfiles Protein kinase domain profile. 1 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01608 339 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 97 300 - -
Phac5g01608 339 SUPERFAMILY Protein kinase-like (PK-like) 32 315 IPR011009 -
Phac5g01608 339 FunFam Uncharacterized protein 28 96 - -
Phac5g01608 339 Pfam Protein tyrosine and serine/threonine kinase 42 289 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01608 Phac-Chr5 36193481 36194914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01608 32 334 Receptor kinase-like Gene Family AT4G23140 54.045 3.63e-118 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac5g01608 PK_Tyr_Ser-Thr 5.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01608 - - vun:114184726 565.459