Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01604 ATGAAGAACTGCGAGCTGTGCAAGGTTCCGGCTCGGACTTTTTGCGAGTCGGACCAAGCCAGCTTATGCTGGGACTGCGACGCCAAGGTCCACGGTGCCAACTTCCTCGTCGCCAGACACACGCGCACGCTCCTCTGCCACACCTGCCAGTCACTCACGCCCTGGAAGGCCTCCGGTGCCGCCCTCGGCAACACCGTCTCCCTCTGCGAGAGGTGCGCCGGCGGAACCGCTGAACAAGGTCAGGAGAGCCATGGAGGCAATGACGACGACTTAGACACAGACGAAGATGACTACGACGACGATGATGAGACCGACGACGAGGTCGCCGCCGACGAGGATGGAGACAACCAGGTTGTCCCTTGGTCCTCCGCGCCGCCGCCGCCTCCCTCGAGCTCTTCCAGTAGCGAAGAGTCGGTTAGCCGGTGCAACAACGCCGACGAGGATGTTTCGACCACATTGAAACGACGTCGTGAGGACAATGATTTCGAGTGTTCGAATTCGAATAATTGGGGATGTCAACAGAGCGAAGTGGAGAGAGGAGGCTGGCTAGTTCGGTTGCGGCGGCGAACCGCCGCGGAAGGTAACGGTCTTGCTATTGAGCGACGGAGTGGCAGAGCGGTGGCTCCCTACGGTTGTGGTGATGATGATAGAGCCTCTGAAGACCTTTGA 669 0.5979 MKNCELCKVPARTFCESDQASLCWDCDAKVHGANFLVARHTRTLLCHTCQSLTPWKASGAALGNTVSLCERCAGGTAEQGQESHGGNDDDLDTDEDDYDDDDETDDEVAADEDGDNQVVPWSSAPPPPPSSSSSSEESVSRCNNADEDVSTTLKRRREDNDFECSNSNNWGCQQSEVERGGWLVRLRRRTAAEGNGLAIERRSGRAVAPYGCGDDDRASEDL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01604 222 SMART bboxneu5 1 45 IPR000315 GO:0008270
Phac5g01604 222 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Phac5g01604 222 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Phac5g01604 222 MobiDBLite consensus disorder prediction 148 163 - -
Phac5g01604 222 CDD Bbox1_BBX-like 4 45 - -
Phac5g01604 222 MobiDBLite consensus disorder prediction 133 147 - -
Phac5g01604 222 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 176 - -
Phac5g01604 222 MobiDBLite consensus disorder prediction 76 171 - -
Phac5g01604 222 MobiDBLite consensus disorder prediction 88 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01604 Phac-Chr5 36168930 36170702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01604 2 166 C2C2-CO-like Transcription Factor Family AT4G27310 44.724 1.12e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac5g01604 zf-B_box 9.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01604 - - gmx:100801024 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01604 5 36168930 36170702 Phac5g01604 5 36168930 36170702 ECH