Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac5g01600 | ATGAAGAACCCATGGTTCTGCATCTCTCTTCTCACCCTATTCTTCTCTTTGTTCACCCACAATTCCCTTGCGGCTCTCACAACCGTATCCGCAAACCAAACTCTCGCTGGGGACCAAACCCTCGTCTCTCAAGGTGAAATCTTCGAGCTGGGTTTCTTCAAACCGGGTAATTCCTCTAACTACTACATAGGCATATGGTACAAAAAGGTCACCAAACAAACAATAGTTTGGGTAGCAAATAGAGACAACCCAGTCTCTGATAAGAACACTGCCACGTTAACAATATCAGGTGGCAATCTAGTTCTCTTGGATGGATCTTCTAAACAAGTTTGGTCAACAAACATGAGTTCTTCCGGGTCAGGTTCTGTCGTAATAGCTACTCTCCTCGATTCCGGGAATCTTGTGTTAAGAGATAGGCATAATGGTGCTTCTGCTTCCGAACCTTTGTGGCAGAGTTTTGATCACCCAACTGACACGTGGCTTCCGGGTGGCAAAATCAAACTGGATAATAAAACTAAGCAACCTCAATACCTCACTTCATGGAAGAACAACGAAGATCCTGCGACGGGTCTTTTTTCTCTGGAACTAGACCCCAAAGGAACCACTTCTTATTTGATTCTTTGGAACAAGTCTGAACAGTACTGGACAAGTGGTCCTTGGAATGGCCACATTTTTAGTTTAGTGCCGGAGATGAGGGCGAACTTTCTCTACAATTTCACGTTTGTGTCGAACGACAACGAGAGCTATTTTACATACTCCATGTATAACTCTTCCATTGTATCTCGGTTTGTGATGGATATCTCGGGGCAGGTCAAGCAACTCTCGTGGTTGGAGAATGCTCAGCAGTGGAACTTGTTTTGGTCACAGCCGAGACAACAGTGTGAGGTATACGCGTTTTGTGGTGTGTTTGGGAGCTGTACTGAGAATTCCATGCCGTATTGTAATTGCTTGCCGGGTTTTGAGCCAAAGTCACTGTTTGATTGGAATCTGGAGGATCACTCAGGTGGGTGTGAAAGGAAAACCAAGTTGCAGTGTGAGAAACTGAATCCCTCTAAAGGGGATAAGGATAGGTTTCTTGCGATTCCCAACATGGTGTTACCTAAACATGCACAATCTGTGGGATCAGGGAAGGCAGGGGAATGTGAATCGACTTGCTTAAACAACTGTTCCTGCACGGCTTATGCATATGGCAGTAACGGGTGTTTTATTTGGATTGGCAACCTTTTGAATCTGCAGAAGCTATCTTTAGATGATAGTAGCGGAGAAACTTTGTATCTCAAACTTGCAGCATCTGAGTTTGATGATGATAAAAGCAGTAAGGGGACTGTTATTGGTGTGGCTGTGGGACTGGTTGTTGGCATTGGAGTTCTCTTGGCCATTCTTTTGTTTTTCGTGATTAGGCGAAGGAAGAGAATGGTCGGAGCAGGAAAGCCTGTGGAGGGTACGTTGGTCGCATTTGGATACCGAGATTTGCAAAATGCAACGAGGAATTTCTCAGAGAAGTTGGGGGGAGGAGGGTTTGGTTCTGTTTTCAAAGGAACGTTGGGTGATTCAAGTGTGGTAGCAGTGAAAAGGTTGGAGAGTATTAGCCAAGGAGAAAAACAGTTCCGAACAGAAGTTAGCACAATAGGGACAGTGCAACATGTTAATCTTGTTAGGCTCCGTGGATTCTGCTCTGAAGGTGCAAAAAAACTGCTAGTTTATGATTACATGCCAAATGGCTCCTTGGATTTCCATTTGTTCCCCAACAAGAGCTGTAAGGTGTTGTTGGATTGGAAAATGAGATACCAAATTGCGTTGGGAACAGCAAGGGGATTAACTTACCTTCACGAGAATTGTAGAGATTGTATCATTCACTGTGATGTGAAGCCAGAAAACATTCTCCTAGATTCTGAATTTTGTCCCAAGGTTGCAGACTTTGGCCTGGCTAAGCTTGTCGGAAGGGATTTCAGCAGGGTTCTCACAACCATGAGAGGAACAAGAGGTTATCTTGCTCCAGAGTGGATTTCTGGGGTGGCTATCACAGCCAAAGCAGATGTGTACAGCTATGGAATGATGCTTTTTGAGTTTGTATCCGGAAGGAGGAACTCTGAGCCATCAGAAGATGGCAAATTTACCTTCTTTCCAACCTTTGCGGCAAATGTTGTTGTCCAAGGTGGTCCTGTTGTTAGCCTTTTGGACCATGGTTTGGAGGGCAATGCTGAGATTGAGGAGGTGACTCGAATAATAAAAGTTGCTTCATGGTGTGTCCAAGACAATGAGGCTCACCGGCCAAGCATGGCTCAGGTGGTTCAAATCCTTGAGGGGATCTTAGAGGTGAACATGCCTCCAATTCCAAGATCCCTTCAAGTGTTTGTTGACAACCAGGAGAATTTAGTCTTTTACACTGACTCAAACTCCACACACAGTTCACAGGAGAAGAGCAACGTTTCAATTACCTCCTCCTCTCAAGCCAGAAGTAACATCTCTTCAGCAAGCTCCAAGTCCACTGGAGGAGAAAATTAG | 2505 | 0.4483 | MKNPWFCISLLTLFFSLFTHNSLAALTTVSANQTLAGDQTLVSQGEIFELGFFKPGNSSNYYIGIWYKKVTKQTIVWVANRDNPVSDKNTATLTISGGNLVLLDGSSKQVWSTNMSSSGSGSVVIATLLDSGNLVLRDRHNGASASEPLWQSFDHPTDTWLPGGKIKLDNKTKQPQYLTSWKNNEDPATGLFSLELDPKGTTSYLILWNKSEQYWTSGPWNGHIFSLVPEMRANFLYNFTFVSNDNESYFTYSMYNSSIVSRFVMDISGQVKQLSWLENAQQWNLFWSQPRQQCEVYAFCGVFGSCTENSMPYCNCLPGFEPKSLFDWNLEDHSGGCERKTKLQCEKLNPSKGDKDRFLAIPNMVLPKHAQSVGSGKAGECESTCLNNCSCTAYAYGSNGCFIWIGNLLNLQKLSLDDSSGETLYLKLAASEFDDDKSSKGTVIGVAVGLVVGIGVLLAILLFFVIRRRKRMVGAGKPVEGTLVAFGYRDLQNATRNFSEKLGGGGFGSVFKGTLGDSSVVAVKRLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGAKKLLVYDYMPNGSLDFHLFPNKSCKVLLDWKMRYQIALGTARGLTYLHENCRDCIIHCDVKPENILLDSEFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSEDGKFTFFPTFAANVVVQGGPVVSLLDHGLEGNAEIEEVTRIIKVASWCVQDNEAHRPSMAQVVQILEGILEVNMPPIPRSLQVFVDNQENLVFYTDSNSTHSSQEKSNVSITSSSQARSNISSASSKSTGGEN* | 835 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac5g01600 | 834 | CDD | STKc_IRAK | 502 | 770 | - | - | |
Phac5g01600 | 834 | CDD | B_lectin | 32 | 156 | IPR001480 | - | |
Phac5g01600 | 834 | PIRSF | SRK | 1 | 819 | IPR024171 | GO:0004674 | |
Phac5g01600 | 834 | FunFam | Serine/threonine-protein kinase | 21 | 153 | - | - | |
Phac5g01600 | 834 | Pfam | PAN-like domain | 353 | 410 | IPR003609 | - | |
Phac5g01600 | 834 | FunFam | Receptor-like protein kinase 4 | 464 | 570 | - | - | |
Phac5g01600 | 834 | Pfam | D-mannose binding lectin | 74 | 182 | IPR001480 | - | |
Phac5g01600 | 834 | Gene3D | Transferase(Phosphotransferase) domain 1 | 571 | 777 | - | - | |
Phac5g01600 | 834 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 617 | 629 | IPR008271 | GO:0004672|GO:0006468 | |
Phac5g01600 | 834 | SMART | serkin_6 | 496 | 766 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac5g01600 | 834 | SUPERFAMILY | Protein kinase-like (PK-like) | 483 | 768 | IPR011009 | - | |
Phac5g01600 | 834 | PANTHER | OS07G0415500 PROTEIN | 8 | 779 | - | - | |
Phac5g01600 | 834 | Gene3D | Phosphorylase Kinase; domain 1 | 464 | 570 | - | - | |
Phac5g01600 | 834 | ProSiteProfiles | Bulb-type lectin domain profile. | 26 | 149 | IPR001480 | - | |
Phac5g01600 | 834 | Pfam | S-locus glycoprotein domain | 215 | 324 | IPR000858 | GO:0048544 | |
Phac5g01600 | 834 | Gene3D | - | 23 | 154 | IPR036426 | - | |
Phac5g01600 | 834 | ProSiteProfiles | PAN/Apple domain profile. | 345 | 429 | IPR003609 | - | |
Phac5g01600 | 834 | CDD | PAN_AP_plant | 341 | 429 | - | - | |
Phac5g01600 | 834 | CDD | TM_EGFR-like | 437 | 471 | - | - | |
Phac5g01600 | 834 | MobiDBLite | consensus disorder prediction | 797 | 834 | - | - | |
Phac5g01600 | 834 | SMART | ntp_6 | 353 | 428 | IPR003609 | - | |
Phac5g01600 | 834 | ProSitePatterns | Protein kinases ATP-binding region signature. | 502 | 524 | IPR017441 | GO:0005524 | |
Phac5g01600 | 834 | ProSiteProfiles | Protein kinase domain profile. | 496 | 771 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac5g01600 | 834 | FunFam | Serine/threonine-protein kinase | 571 | 775 | - | - | |
Phac5g01600 | 834 | SMART | blect_4 | 32 | 156 | IPR001480 | - | |
Phac5g01600 | 834 | Pfam | Protein kinase domain | 499 | 765 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac5g01600 | 834 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 60 | 221 | IPR036426 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac5g01600 | Phac-Chr5 | 36123673 | 36126667 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac5g01600 | 452 | 777 | Receptor kinase-like Gene Family | AT5G20050 | 42.500 | 9.93e-83 | 270 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Phac5g01600 | Pkinase | 1.8e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac5g01600 | - | - | gmx:100810583 | 1324.69 |