Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01594 ATGGCAAGAACCCCTTGTTGCGACAAAAATGGGCTCAAGAAAGGATCATGGACACGAGAGGAAGACAAGAAGTTGATCGCTTATGTCACCAAGTACGGCCACTGGAATTGGCGCCTGCTCCCCAAGTTTGCAGGTCTTGCAAGGTGTGGGAAGAGTTGCAGGCTGAGATGGCTGAACTATCTAAGGCCAGATGTTAAAAGAGGGAATTTTAGTGACGAGGAAGAAGAAATCATTGTGAGACTTCACGAAAAGCTTGGTAATAGATGGTCAACAATTGCTGCTGAACTGCCAGGGAGGACTGATAACGAGATAAAAAACCACTGGCACACCGTCCTCAAGAAGCGTTTTGAACAAAAAGCAGAAGCTAAACGCGGAATTGGAAAAGAATCTTCTATTTCCAGGTCATTTGAGACGGTATCAGAGAATTACAGTGACCCAGATGCAACAAATGCTTCTCCTGTTGCACCAGCTGCCGCTACAAATCATGAAAGTGATGATGGTCTTTCCTTTTTTGATGCATACTCGGAGCCTGTGTCTGCAGATTTCTGGACAGAACCTTATTTAATTGACAACTCCTATGTTCCACCCGAGTTTGAACCTGTTTACTTTAGTCCCATGTACGATGTAGAACTTTGGAACCAGAATGAGTTGTATCTGCAGGAATGTGAGGGCTTATTCCAATGA 684 0.4444 MARTPCCDKNGLKKGSWTREEDKKLIAYVTKYGHWNWRLLPKFAGLARCGKSCRLRWLNYLRPDVKRGNFSDEEEEIIVRLHEKLGNRWSTIAAELPGRTDNEIKNHWHTVLKKRFEQKAEAKRGIGKESSISRSFETVSENYSDPDATNASPVAPAAATNHESDDGLSFFDAYSEPVSADFWTEPYLIDNSYVPPEFEPVYFSPMYDVELWNQNELYLQECEGLFQ* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01594 227 MobiDBLite consensus disorder prediction 139 161 - -
Phac5g01594 227 FunFam MYB-related transcription factor 13 66 - -
Phac5g01594 227 CDD SANT 69 112 IPR001005 -
Phac5g01594 227 Gene3D - 13 66 - -
Phac5g01594 227 CDD SANT 16 61 IPR001005 -
Phac5g01594 227 SMART sant 13 63 IPR001005 -
Phac5g01594 227 SMART sant 66 114 IPR001005 -
Phac5g01594 227 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Phac5g01594 227 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac5g01594 227 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac5g01594 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac5g01594 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac5g01594 227 MobiDBLite consensus disorder prediction 139 157 - -
Phac5g01594 227 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac5g01594 227 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 123 - -
Phac5g01594 227 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac5g01594 227 Gene3D - 68 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01594 Phac-Chr5 35828136 35831668 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01594 1 192 MYB Transcription Factor Family AT2G31180 50.505 1.16e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac5g01594 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01594 K09422 - gmx:100815765 323.553