Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01593 ATGATGAGAACCCCTTCCTGGGACAATAGTGGACTTAGGAAAGGCACTTGGACTCAAGAGGAAGATAGGAAGCTCGTAGCTTATGTCACTCGATATGGGACTTGGAATTGGCGCCAACTCCCAAGATTTGCAGGTCTGACAAGGTGTGGAAAGAGCTGCAGACTTAGGTGGCTCAATTATCTCAAACCCAACATAAAAAGAGGAAACTTTACTGAGAAAGAAGAAGAAACTATAATCAAACTGCACGAAGAGCTGGGTAACAAATGGTCTGTTATTGCCACTCATTTACCCGGAAGAACAGATAACGAAATAAAGAACCGGTGGCACACCACTCTGAAAAAGCGTTTTGGAAAGAAGGCAGTTCATACCAGAACAAATGTGAAAGCCGCAAAATCAAACAGTTCTGTGTCCAACCAAGACAAGGATTCCATTCATAACAATGGTTTCTTCCACGAAGATTCTCCTTCTCCAACAATTTCTAGAGCCTCTGATCCTGACCCTTTGTCCCTGGAATTATCCTCAATCGAGTTCTCGTCCACAACCTCAGATTATACCACTAACGATAATTTGTTAATGGAAGATGGGTTCGATTTTCTGAATGCATGCTTAGAGGATTTGAACCAGAATATTTCGACAGAGTCGTTACACATTTCTCACGGCACAATACAAAACAATGGTATTGAAAATTTTCATGGTTCAGATCCGATGGCCATGGAATATGTTTGGGCAGATTCTCCTCTGTCGTCCTATAATGAAAATGTGGTTGCGGAAAATGATGATTTTGGGTTTCTAGAAGCAATACAACCCATAACTGAAAATTCTTGGACAGAAGCATTCGTGGCAGACACGTCTCTTATTCCGAACGAATTTCTTGTTCCTTTGGTGAACGAATCCGAGTCATACTTTTCTTCTACGTATGATGCGGGAGATATTTGGTGTCTCCGCGATAATTCTCATGATTTAGACGTCAACTTATTTCAATGA 984 0.4136 MMRTPSWDNSGLRKGTWTQEEDRKLVAYVTRYGTWNWRQLPRFAGLTRCGKSCRLRWLNYLKPNIKRGNFTEKEEETIIKLHEELGNKWSVIATHLPGRTDNEIKNRWHTTLKKRFGKKAVHTRTNVKAAKSNSSVSNQDKDSIHNNGFFHEDSPSPTISRASDPDPLSLELSSIEFSSTTSDYTTNDNLLMEDGFDFLNACLEDLNQNISTESLHISHGTIQNNGIENFHGSDPMAMEYVWADSPLSSYNENVVAENDDFGFLEAIQPITENSWTEAFVADTSLIPNEFLVPLVNESESYFSSTYDAGDIWCLRDNSHDLDVNLFQ* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01593 327 CDD SANT 69 112 IPR001005 -
Phac5g01593 327 Gene3D - 68 144 - -
Phac5g01593 327 Gene3D - 14 66 - -
Phac5g01593 327 MobiDBLite consensus disorder prediction 123 167 - -
Phac5g01593 327 CDD SANT 16 61 IPR001005 -
Phac5g01593 327 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 208 - -
Phac5g01593 327 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac5g01593 327 FunFam MYB-related transcription factor 13 66 - -
Phac5g01593 327 SMART sant 66 114 IPR001005 -
Phac5g01593 327 SMART sant 13 63 IPR001005 -
Phac5g01593 327 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac5g01593 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac5g01593 327 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac5g01593 327 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Phac5g01593 327 MobiDBLite consensus disorder prediction 126 163 - -
Phac5g01593 327 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac5g01593 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01593 Phac-Chr5 35783202 35784656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01593 1 144 MYB Transcription Factor Family AT2G31180 56.944 3.59e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac5g01593 Myb_DNA-binding 6.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01593 K09422 - gmx:100811124 384.8