Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01580 ATGGCAGAACATAAACTTATTGAGAAATCTGAAGTTGCTCCAGCATCACTTCCTAGTTCTACCACAAGAACAACCTCGTCCCTTCCCCTCTCATTCCTTGACTTGCCTTTAGCTGGTCCTATTTATGTCAAACGCCAATTCTTCTATCAGTTTTCCCATTCCACACACCATTTTTGTGAAACTACACTCCCCACTCTCAAACACTCTCTCTCTCTCATCCTTCAACACTTCTTTCCTCTCGCAGGAAATCTTCTTTCTCCTCCACCACCCCACAAACCCTTCATTCGCTGCACTGATGATGACACTGTCACTTTAACCATCATTGAATCCAAAGCTGATTTCAACCATCTCTCATCCAACCACCCTAAGAGTCTCAAAGAATTGGATCAATTGCTTCCCGAGTTGACATTCACAACCATGCATGATGATGAAGATGCCACGTTCATTTTCCCATTAGTGGCATTACAAGTCACGGTTTTCCAAAACCAAGGCCTTTGCATCGCCATCACGTATTGTCATGTGATGGATGGTAAGTGTTGCAATCATTTCATGAAGTCTTGGTCTTCTCTTTGTCAAAGTGGTGGAGTTGACTTGACACTTTTAGAGAAATCACCTCCATGGTTCGGCAGGGAAGTGTTGAAAGACCCCAGAGGACTCGAGGACATTTTCTTGAGAGACTATTTCGAAGAGAGATCAACTTGGAAGGACAAGCTCATTGATCAAACTCCTAAATATGTGTGTGATGATGAGGAGTATTGTAAGGCGACGATTGTTTTTGGGAAAGATGATATTGAAGGCTTAAAAACATGGGCTCTAGCACAGTGGAAGAAAAATGAGGAGTTTAACTCCCCGCAATATTTGTCAAAATTTGTGGTTATTTGTGCTCTTGTGTGGGCTAGCTTGGTTAAAACAAGATGCAAAGATCACGATGATGAAGATGTGAAAGAAGAATACTTTCGTTTCGCTGCAGATTGCAGAGATCGCCTTGGTTATCCTATACCAGAAACATACTTTGGAAACTGCTTAACGCTATGTTATGCCATGCTTAGGAGAAATGAGCTTAAGGGAGAGGATGGTTTTGTGAATGCGGTGAAGGTAATTGAAAAGACAGTGAGTGACATGAAAAGTGAGCTGTTTAAGGATGCAGAACATTGGAGGGCTTTGTTTATAAAGTCGTTTGTGTTGGGAACTACGTTGCTAGTTACTGGGTCACCCAGCTTCGATGTTTATGAGACTGATTTTGGATTTGGAAGGCCTACCAAAGTTGACATGGTACATTCCTTCAAGTGCATCTCTCTGGCCCAAAGTAGAGATGAGGAAGGAGGAGTTGAGGTTGGTTTGGTGTGTAAAAGTGCAGAGTTTGCACATTTATTTTACGCCATTGAACAAGGACTACAAACTGCAAAATTTTAA 1413 0.4197 MAEHKLIEKSEVAPASLPSSTTRTTSSLPLSFLDLPLAGPIYVKRQFFYQFSHSTHHFCETTLPTLKHSLSLILQHFFPLAGNLLSPPPPHKPFIRCTDDDTVTLTIIESKADFNHLSSNHPKSLKELDQLLPELTFTTMHDDEDATFIFPLVALQVTVFQNQGLCIAITYCHVMDGKCCNHFMKSWSSLCQSGGVDLTLLEKSPPWFGREVLKDPRGLEDIFLRDYFEERSTWKDKLIDQTPKYVCDDEEYCKATIVFGKDDIEGLKTWALAQWKKNEEFNSPQYLSKFVVICALVWASLVKTRCKDHDDEDVKEEYFRFAADCRDRLGYPIPETYFGNCLTLCYAMLRRNELKGEDGFVNAVKVIEKTVSDMKSELFKDAEHWRALFIKSFVLGTTLLVTGSPSFDVYETDFGFGRPTKVDMVHSFKCISLAQSRDEEGGVEVGLVCKSAEFAHLFYAIEQGLQTAKF* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01580 470 Pfam Transferase family 18 453 - -
Phac5g01580 470 MobiDBLite consensus disorder prediction 1 26 - -
Phac5g01580 470 Gene3D - 4 239 IPR023213 -
Phac5g01580 470 Gene3D - 249 467 IPR023213 -
Phac5g01580 470 PANTHER - 5 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01580 Phac-Chr5 35630942 35632508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01580 47 419 Monolignol Biosynthesis Gene Families AT5G48930 23.117 1.08e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01580 - - var:108332870 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01580 5 35630942 35632508 Phac5g01580 5 35630942 35632508 ECH