Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01579 ATGGCTCACCTGAGAGAACTTGATTCATTGAAGATCATAGAGCGGTGTCAAGTTTCTCCGCCACCAAATTCTATTCCTTCAACCACCCTTCCCCTCACTTTCTTCGATATTCCATGGTTCTTCTGCAACTCCATCCAACGCATCTTCTTCTATCAGTTTCCCCACCCCACTCACCACTTCCTCCAAACAGCACTTCCCATTCTCAAACACTCTCTTTCCCTCTCTCTCCAACACTTCTTCCCCTTTGCCTCCAATCTTATTGTTCCACCACAACTCCATCTCTCTCACATCCGTTACCTTCATGGCGACTCTCTCTCCTTCACGGTTGCAGAGTCCATAGCAGACTTCACTCTCCTTACATCTCATTCACCTCAAGACGTTCGAAACTGGCACCCTCTTGTGCCCACCTTGCCTTCCCCTCGTCTGGAGCAAGATGGCACACGTGTGTTTCCTCTCATGGCCATTCAAGTCACGGTTTTCCCAAACTTCGGCTTCAGCATATGTCTTACCTTCAACCACCTTGCTGGGGATGGTAAATCACTTCATCACTTCATCAAGTTTTGGGCTTCTCTTTGCAAGGCAAAAGGGGACTTGGCTTCCATTGAAACCTCTCTGTCTCTTCCTTCACACGAGAGAGACAAAGTTAAAGACCCAAAGGGGCTTAAGTTCATTTACTTTCAAGAACTTGAACATTGTGATTCGAAAAGCATGGAGTTCGCTGGGCTCGTCCGAGAGCTTTCCACTAACAAGGTTCGCTTCAATGTTGTACTCGATCTTGAACAAGTTGATAAACTAAAGAAATGGGTCTCTCTTAAATGTGCCACCAACGATTCGGGGGCATTACACATATCAACTTTTGTTGTCGCGTGCTCTATAATTTGGGTTTGCATGATTCGGTCAGAAGAGAAAAAAGCCAATTGTTTTTCCCAAGAGGGTGATGAACTTTGCCACTTGGTGTTTCTAGCAGATTGCCGTGATCTTACTGAATTTTCAATACCTTCCACGTACTTTGGAAATTGTCTAACCTCTTACATTGTGGCAATAAAGAGGAGTGAGCTAGTGGGAAAAAGTGGTATTGTAGGGGCAGCAAACGCCATTGAAAGACAAGTTAGAGATTTGAAGAGTGATGCTTTGAGAAATGCTGAAACGTTGATGTCAGATTACAGAGAGATAGGGAAACCAGGTAAATCTGTGCTGGTTATTGCAGGTTCACCAAAATTGGGTGTGTACCAGACTGATTTTGGTTGGGGAAAGCCTAAGAAATGTGAAGCAGCGCATATTGAATCGTCTGGATCAATTTCTCTTTCTGATTGTAGAGACGAAAAAGGAGGAATTGAGGTTGGATTGGCTCTTGAAAGGACTCAGATGAATAAGTTCACCAACATCTTACAAGAGCAACTCCACAATATTAATAAATTTTTCTACGTTTTCCAAAAACATTTCTTTGATGTCAACCACAAAACCTCTCTCACATAA 1476 0.4356 MAHLRELDSLKIIERCQVSPPPNSIPSTTLPLTFFDIPWFFCNSIQRIFFYQFPHPTHHFLQTALPILKHSLSLSLQHFFPFASNLIVPPQLHLSHIRYLHGDSLSFTVAESIADFTLLTSHSPQDVRNWHPLVPTLPSPRLEQDGTRVFPLMAIQVTVFPNFGFSICLTFNHLAGDGKSLHHFIKFWASLCKAKGDLASIETSLSLPSHERDKVKDPKGLKFIYFQELEHCDSKSMEFAGLVRELSTNKVRFNVVLDLEQVDKLKKWVSLKCATNDSGALHISTFVVACSIIWVCMIRSEEKKANCFSQEGDELCHLVFLADCRDLTEFSIPSTYFGNCLTSYIVAIKRSELVGKSGIVGAANAIERQVRDLKSDALRNAETLMSDYREIGKPGKSVLVIAGSPKLGVYQTDFGWGKPKKCEAAHIESSGSISLSDCRDEKGGIEVGLALERTQMNKFTNILQEQLHNINKFFYVFQKHFFDVNHKTSLT* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01579 491 Pfam Transferase family 21 461 - -
Phac5g01579 491 Gene3D - 247 470 IPR023213 -
Phac5g01579 491 PANTHER - 10 469 - -
Phac5g01579 491 Gene3D - 9 240 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01579 Phac-Chr5 35611191 35615268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01579 37 465 Monolignol Biosynthesis Gene Families AT5G48930 24.169 6.22e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01579 - - gmx:100797294 764.992