Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01578 ATGGCTCACCTGAGAGAACTTGATTCATTGAAGATCATAGAGCGGTGTCAAGTTTCTCCGCCACCAAATTCTATTCCTTCAACCACCCTTCCCCTCACTTTCTTCGATATTCCATGGTTCTTCTGCAACTCCATCCAACGCATCTTCTTCTATCAGTTTCCCCACCCCACTCACCACTTCCTCCAAACAGCACTTCCCATTCTCAAACACTCTCTTTCCCTCTCTCTCCAACACTTCTTCCCCTTTGCCTCCAATCTTATTGTTCCACCACAACTCCATCTCTCTCACATCCGTTACCTTCATGGCGACTCTCTCTCCTTCACGGTTGCAGAGTCCATAGCAGACTTCACTCTCCTTACATCTCATTCACCTCAAGACGTTCGAAACTGGCACCCTCTTGTGCCCACCTTGCCTTCCCCTCGTCTGGAGCAAGATGGCACACGTGTGTTTCCTCTCATGGCCATTCAAGTCACGGTTTTCCCAAACTTCGGCTTCAGCATATGTCTTACCTTCAACCACCTTGCTGGGGATGGTAAATCACTTCATCACTTCATCAAGTTTTGGGCTTCTCTTTGCAAGGCAAAAGGGGACTTGGCTTCCATTGAAACCTCTCTGTCTCTTCCTTCACACGAGAGAGACAAAGTTAAAGACCCAAAGGGGCTTAAGTTCATTTACTTTCAAGAACTTGAACATTGTGATTCGAAAAGCATGGAGTTCGCTGGGCTCGTCCGAGAGCTTTCCACTAACAAGGTTCGCTTCAATGTTGTACTCGATCTTGAACAAGTTGATAAACTAAAGAAATGGGTCTCTCTTAAATGTGCCACCAACGATTCGGGGGCATTACACATATCAACTTTTGTTGTCGCGTGCTCTATAATTTGGGTTTGCATGATTCGGTCAGAAGAGAAAAAAGCCAATTGTTTTTCCCAAGAGGGTGATGAACTTTGCCACTTGGTGTTTCTAGCAGATTGCCGTGATCTTACTGAATTTTCAATACCTTCCACGTACTTTGGAAATTGTCTAACCTCTTACATTGTGGCAATAAAGAGGAGTGAGCTAGTGGGAAAAAGTGGTATTGTAGGGGCAGCAAACGCCATTGAAAGACAAGTTAGAGATTTGAAGAGTGATGCTTTGAGAAATGCTGAAACGTTGATGTCAGATTACAGAGAGATAGGGAAACCAGGTAAATCTGTGCTGGTTATTGCAGGTTCACCAAAATTGGGTGTGTACCAGACTGATTTTGGTTGGGGAAAGCCTAAGAAATGTGAAGCAGCGCATATTGAATCGTCTGGATCAATTTCTCTTTCTGATTGTAGAGACGAAAAAGGAGGAATTGAGGTTGGATTGGCTCTTGAAAGGACTCAGATGAATAAGTTCACCAACATCTTACAAGAGCAACTCCACAATATTAATAAATTATAG 1422 0.4395 MAHLRELDSLKIIERCQVSPPPNSIPSTTLPLTFFDIPWFFCNSIQRIFFYQFPHPTHHFLQTALPILKHSLSLSLQHFFPFASNLIVPPQLHLSHIRYLHGDSLSFTVAESIADFTLLTSHSPQDVRNWHPLVPTLPSPRLEQDGTRVFPLMAIQVTVFPNFGFSICLTFNHLAGDGKSLHHFIKFWASLCKAKGDLASIETSLSLPSHERDKVKDPKGLKFIYFQELEHCDSKSMEFAGLVRELSTNKVRFNVVLDLEQVDKLKKWVSLKCATNDSGALHISTFVVACSIIWVCMIRSEEKKANCFSQEGDELCHLVFLADCRDLTEFSIPSTYFGNCLTSYIVAIKRSELVGKSGIVGAANAIERQVRDLKSDALRNAETLMSDYREIGKPGKSVLVIAGSPKLGVYQTDFGWGKPKKCEAAHIESSGSISLSDCRDEKGGIEVGLALERTQMNKFTNILQEQLHNINKL* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01578 473 Gene3D - 9 241 IPR023213 -
Phac5g01578 473 PANTHER - 10 469 - -
Phac5g01578 473 Gene3D - 247 470 IPR023213 -
Phac5g01578 473 Pfam Transferase family 21 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01578 Phac-Chr5 35606907 35615268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01578 37 465 Monolignol Biosynthesis Gene Families AT5G48930 24.169 4.91e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01578 - - gmx:100797294 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01578 5 35606907 35615268 Phac5g01578 5 35606907 35615268 ECH