Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01518 ATGGCTGCAGCGAACCGTGGGAAATTCGATATGGGAGATGAAACTAACAATTGTTCCCAGAAGGGAAGTGAAGGCAAAGATTGGGAGGTTGAAAGGGGAAAGGGCATGGGTTCAAGCACTCAGAGGCGTCAATGGAAGCCAGTTTTTGATGATACTTCCATTTCACACAATAGACCTCTGAAGAAAATCCGCAGCCCCGATCGCCATAACACAAACCAATCTTCCTCCTCTTCTTCTTCTTCTGCCCCTTTTCAACCTTCTCCTCTCTCTACCCCTCCTTCATCCTCTTCAAGAATCGTGTTCCCTTTCGCCTTCAACGGTTCCCAACACCCAATGCAATTCCCTCACCAATTCGGAGCCACAAATTCACCTTTCCCTCACCCCTCTTTCCAAAACCAGCAACAACAGATGATATCATTCGATTCCCAACAACAAAACCTTCCCTTTCCACCAATCATGGCCAGAGATTCTTCTCTTCCACACTACCACCATCATCAACAGCATCCGCAGCAACTTCTTCAGTATTGGAGCGACGCTCTGCATCTAAGTCCGAGAGGAATGTTAACCCACTTGGGGCCAGATGGAAGGCCGTTGTTTAGGCCTCCAACGCAGCCCATAAACACCACCAAGCTCTACAGAGGAGTGAGGCAACGCCATTGGGGAAAATGGGTCGCTGAAATTCGTCTTCCTCGAAACAGAACGCGTCTCTGGCTAGGTACATTCGACACGGCGGAGGACGCCGCCATGGCCTACGACCGCGAAGCCTTCAAACTCCGAGGAGAAAATGCCAGGCTCAATTTCCCCGAACTGTTCCTCAACAAGGACAAAAACAAACAAGTTGAAGAAGAAGCTTCTTCACCCGTTCAAAACCAGCCTGAACTTGAACCTGTTCCTGTAGGTCGTGACATGCCAAGAGAAGAGTCTAATGAGAATGACTCGGGAATTGGATCGAGTGACGCCACTGATGAGGTTCATGCTGCTGCTGCAGAAGGAGGTGAAGGGGTTTCTCAGGAGCTTGTTTGGGGAGAAATGTCTGCATGGTTCAATGCTATTCCTGCAGCTTGGGGACCTGGTAGCCCTGTGTGGGATGATTTGGATACCACCAATAATCTTCTTTACCAATCACACGTTCCTTTTTCAAATTCCAATCAGCAGGAGATCAATGATGCTCAGAGACATGAACATAACATGGGACCAGGTTACTTATGGAAGGATCAGGATTGA 1224 0.4861 MAAANRGKFDMGDETNNCSQKGSEGKDWEVERGKGMGSSTQRRQWKPVFDDTSISHNRPLKKIRSPDRHNTNQSSSSSSSSAPFQPSPLSTPPSSSSRIVFPFAFNGSQHPMQFPHQFGATNSPFPHPSFQNQQQQMISFDSQQQNLPFPPIMARDSSLPHYHHHQQHPQQLLQYWSDALHLSPRGMLTHLGPDGRPLFRPPTQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKDKNKQVEEEASSPVQNQPELEPVPVGRDMPREESNENDSGIGSSDATDEVHAAAAEGGEGVSQELVWGEMSAWFNAIPAAWGPGSPVWDDLDTTNNLLYQSHVPFSNSNQQEINDAQRHEHNMGPGYLWKDQD* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01518 407 CDD AP2 210 270 IPR001471 GO:0003700|GO:0006355
Phac5g01518 407 MobiDBLite consensus disorder prediction 69 95 - -
Phac5g01518 407 Pfam AP2 domain 212 260 IPR001471 GO:0003700|GO:0006355
Phac5g01518 407 MobiDBLite consensus disorder prediction 278 319 - -
Phac5g01518 407 MobiDBLite consensus disorder prediction 37 51 - -
Phac5g01518 407 SUPERFAMILY DNA-binding domain 211 269 IPR016177 GO:0003677
Phac5g01518 407 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 26 365 - -
Phac5g01518 407 FunFam Ethylene-responsive transcription factor 2 210 269 - -
Phac5g01518 407 Gene3D AP2/ERF domain 211 269 IPR036955 GO:0003700|GO:0006355
Phac5g01518 407 SMART rav1_2 211 274 IPR001471 GO:0003700|GO:0006355
Phac5g01518 407 MobiDBLite consensus disorder prediction 1 95 - -
Phac5g01518 407 PRINTS Ethylene responsive element binding protein signature 212 223 IPR001471 GO:0003700|GO:0006355
Phac5g01518 407 PRINTS Ethylene responsive element binding protein signature 234 250 IPR001471 GO:0003700|GO:0006355
Phac5g01518 407 ProSiteProfiles AP2/ERF domain profile. 211 268 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01518 Phac-Chr5 35064604 35067005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01518 51 381 AP2-EREBP Transcription Factor Family AT2G20880 45.238 9.35e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac5g01518 AP2 2.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01518 - - gmx:100809887 604.749