Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01497 ATGTCGGAGAGAAATGATAGTAAAGGAAAGAGAATCATCATTGGTGTATCAACCTTATTCTTAATGGCTATAATTGGGATTGTCGCATTTGGTATCAACCTTATTGATGATGGTGAAAAAGAGAATTTTAATAACAAAAAGAACCATGTTTCCTCCACTATAAAAGTTGTCCATAACCTTTGTCATCCCACGAATTATAAGAAAGAATGTGAGGAAAGCCTAAGAGTGGGGGCTGGAAACTCCACAGATCCAAAAGAACTTATTAAAATTGCTTTCAATATCACCATTACAAATATTGGTGATAAACTCAAAGAAGCTAATCTATTGCATGACGTTGAGAAGGAGCCTAGAGCCAAGATGGCACTTGACACCTGCAAACAACTCATGAATCTTTCAATTAGGGAGTTAACAAGGTCACTTAATGGAATAAGCGAGTTTGAGCTGATAAATGTTGAGAAAATCCTCATGAATTTGAAAGTTTGGCTTAGTGGTGCAATTACATACCAAGACACTTGCTTGGATGGGTTTGAGAACACCACTAGTGAAGCTGGTAAAAAGATGAAGGATTTATTAATGATAGGCATGGAAATGAGTAGCAATGTTCTTGCCATTGTAACAAAATTGGCTGATACTATTACAAATTCGAATGTCACAAACTTACTCGGGCATCGCCACCTTCAAGGTTTTGAGTCACCCTCATGGATTGATCATCATGGACTACTCAATGCAAATGCAAGTCTATTTAATCACAAGCCTAATGTGACGGTAGCCAAAAGTAATGGAGATTTCAAAAACATTAATGAGGCACTGAAGCAAGTTCCTGAGAAAAATAAAAGGCCATTTATTATCTACATCAAGGAGGGCATCTACCAAGAGTATGTTCAAGTTACAAAGGATATGACTCACGTGGTTTTCATTGGTGATGGTGGGAAAAAAACACGAATAACGGGCAACAAAAACTTCATTGATGGAATCAACACTTACAGAACTGCCACAATTGCTATTCAAGGAGATTACTTTGTGGCCATCAACATGGGATTTGAGAACTTTGCTGGACCTCAAAAGCATCAGGCAGTGGCATTGAGAGTTCAAGCAGACAAGTCTATCTTCTACAATTGCTCAATGGATGGGTATCAAGACACACTTTATGTGCACACCATGCGTCAATTCTATAGGGATTGCACCATTTCAGGTACCATCGACTTTGTGTTTGGAAATGCACTTGCTGTTTTCCAAAATTGCACTTTTGTGGTCCGAAAGCCATTGAAAAATCAACAATGCATTGTGACTGCGCAAGGTAGAAAAGAGAAACAACAACCGTCTGGAATAGTAATCCAAGGGGGCTCCATTGTGTCTGACCCTGAGTTTTACTCAATAAGATTTGAAAATAAAGCTTACCTAGCTCGTCCTTGGAAGAATTACTCTAGGACCATTATCATGGACACTTACATTGATGACTTGATTCATGCTTATGGGTATTTGCCATGGCAAGGATTAGAAGGCCCTTCTGGTATGGATACTTGCTTTTATGCCGAGTATCACAACACTGGCCCTGGTTCAAATAAATCCAAACGTGTGCGTTGGTCTGGGATTTGGAATCTAAATTCAAAAGCTGTACACTGGTTTTCACCTTCCAAGTTCTTTCATGGAACTGACTGGATTCATGTTACTGGGATTCCTTGCTTCCCTGGCATACCCACACACTATAGGCACAAGAAAATGATACTTAAATGGTGA 1737 0.3909 MSERNDSKGKRIIIGVSTLFLMAIIGIVAFGINLIDDGEKENFNNKKNHVSSTIKVVHNLCHPTNYKKECEESLRVGAGNSTDPKELIKIAFNITITNIGDKLKEANLLHDVEKEPRAKMALDTCKQLMNLSIRELTRSLNGISEFELINVEKILMNLKVWLSGAITYQDTCLDGFENTTSEAGKKMKDLLMIGMEMSSNVLAIVTKLADTITNSNVTNLLGHRHLQGFESPSWIDHHGLLNANASLFNHKPNVTVAKSNGDFKNINEALKQVPEKNKRPFIIYIKEGIYQEYVQVTKDMTHVVFIGDGGKKTRITGNKNFIDGINTYRTATIAIQGDYFVAINMGFENFAGPQKHQAVALRVQADKSIFYNCSMDGYQDTLYVHTMRQFYRDCTISGTIDFVFGNALAVFQNCTFVVRKPLKNQQCIVTAQGRKEKQQPSGIVIQGGSIVSDPEFYSIRFENKAYLARPWKNYSRTIIMDTYIDDLIHAYGYLPWQGLEGPSGMDTCFYAEYHNTGPGSNKSKRVRWSGIWNLNSKAVHWFSPSKFFHGTDWIHVTGIPCFPGIPTHYRHKKMILKW* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01497 578 Pfam Pectinesterase 253 550 IPR000070 GO:0030599|GO:0042545
Phac5g01497 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 210 IPR035513 -
Phac5g01497 578 Gene3D - 251 566 IPR012334 -
Phac5g01497 578 NCBIfam pectinesterase inhibitor domain 53 208 IPR006501 GO:0004857
Phac5g01497 578 ProSitePatterns Pectinesterase signature 1. 277 296 IPR018040 -
Phac5g01497 578 PANTHER PECTINESTERASE 22 555 - -
Phac5g01497 578 CDD PMEI-like_3 60 209 - -
Phac5g01497 578 SMART PMEI_2 52 204 IPR006501 GO:0004857
Phac5g01497 578 FunFam Pectinesterase 248 565 - -
Phac5g01497 578 Pfam Plant invertase/pectin methylesterase inhibitor 56 204 IPR006501 GO:0004857
Phac5g01497 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 208 IPR035513 -
Phac5g01497 578 FunFam Pectinesterase 53 209 - -
Phac5g01497 578 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Phac5g01497 578 SUPERFAMILY Pectin lyase-like 251 562 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01497 Phac-Chr5 34898886 34901213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01497 5 565 Carbohydrate Esterase AT3G05610 47.359 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01497 K01051 - gmx:100776244 977.237