Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01487 ATGGGGTGCATAGCTTCCAAGAGTGCTGCTGTTGATGACAGCAGGGAGGGTGTGGCAAGGGAATTGACTTCATCCAGCAGAAGGGCATCTGAGATGAAGGTTTCTGCATTGAGTTCCAAGAAAAGGGTCGATGGAGTTTGGGGAAAAGATAAGGTTTTAGATGGTGCTGATATGAAAGTGTCATTAATTGGCAAGGAATCTGTTGGTTCGATGCGGTTGTTTGATTATCAGAATGGGAAGAAGAAAAAGGAGAAACCTGAATCTTCTGCTCTTGATCATCCCGGTCTTGGAAGGGTTCCTAAGGGTTTAGAAGGAGAGCAAGTTGCAGCAGGTTGGCCAACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCCAAGGGTGGATACCACGGAGGGCAGATACTTTTGAGAGGTTTGGTAAAATTGGCCAAGGAACCTACAGTTCTGTGTACAAGGCACGTGATTTGACTCACCAAAAGATCGTTGCATTGAAGAGGGTACGCTTTGATAACTTTGACGCTGAGAGTGTCAAGTTTATGGCAAGGGAAATCCTTGTTCTGCGTAGGCTTGACCATCCAAATATAATAAAGTTGGAAGGATTGATAACGTCGCAGACATCTCGCAGCCTGTACCTTGTTTTTGAATACATGGAACATGATCTTACAGGACTTGCATCAAGTCCTAGCATTAAGTTTTCCGAACCACAGGTTAAGTGTTACATGCAGCAGCTTCTTAGTGGATTGAATCATTGTCATAGTCGAGGTGTCCTCCACCGTGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGCACCTTAAAGATTGCAGATTTTGGTTTGGCAAATTTTATTGACCCCCATCACAAGGTTCCATTGACCAGCCGTGTAGTAACTTTGTGGTATAGACCACCAGAACTCTTACTCGGAGCATCTAATTACGGAGTTGCAGTAGATTTGTGGAGCACTGGTTGCATACTAGGGGAATTATATTGTGGCAGGCCTATTTTGCCTGGAAAAACAGAGGTTGAGCAATTGCATAGGATTTTTAAACTTTGTGGCTCACCATCTGAGGACTATTGGCGTAAGCTGCGGTCACCACATTCAACAGTATTCAGGCCTCCCCACCATTATAGACGTTGTATTGCTGAAACATTTAAAGAATATCCATCTGCTGTCACAAGGCTCATCGAGTCCCTACTTGCTTTAGATCCCACACTTCGAGGAACAGCGGCTACAGCCCTGAAGAGTGAGTTCTTTTCAACGGAACCCCTTCCTTGCGATCCATCTAGTTTACCAAAATATCCTCCCTGCAAAGAGATTGACACTAAATTGTGGGAAGAAGCAACAAGGCAAGGAGCTGATGGGAGAAAGGAGAAGAAAAATGGACCAAGAGTTCGACAAGAGAAAGAACCTCAGACATTTATTTTATCCAAAGACAATGAGGGCCCTCGCATATCAATGCAGCAAGGGCAACGCCTTCCAAACTCAAGGAGCCAGAACGAGTTCTTCAACCCTCACAGGGAACCTGTTTCTGGACATTTGGTTTTTCCACAGAAACCATCAGAGGATTATAAAGCAACAGTAAATTATTTCTCGGGGCCTCTTTATCAGAGGCCTATGCATTCAGGTCCATTGGTTCCAGGCAATGGCTGGGAAATGGCTGGAAAGGAAGGTGGTGAGCAGCCTCATGTTTCAAACAAAGTCAACCTACCAAAACTATCTGGAGTGGCATCTAGGACTTCATTGTCTGGAGACAAAAAGGAAAACCATGTTTCGTCGAGGCCCCAAGAAGCAATTCAAGCACAAAGATCTTTGGAGTCAACTAATGTTGGATCCGATTCAAGAAGAAGGCATGATAAAAAACGCCATTCTCATAGAATTGATCACAGGCAAATCGAAAACGCCAAAGTCTCAACTCAAACACAAATTCTGGAGGGGCATGGACCCATGGGAAACAATATCGGCCACCTCTCTGGTCCATTACTGGTTTCATCAAACAATATGGATCAGATGCTCAAAGAGCGTGATCGAAAGATCCAAGAATATTCGAGACGAGCACGAATGTACAAGTCAGGTGAGATAGCTCGTGCAAACCAAAATTAG 2103 0.4432 MGCIASKSAAVDDSREGVARELTSSSRRASEMKVSALSSKKRVDGVWGKDKVLDGADMKVSLIGKESVGSMRLFDYQNGKKKKEKPESSALDHPGLGRVPKGLEGEQVAAGWPTWLSSVAGEAIQGWIPRRADTFERFGKIGQGTYSSVYKARDLTHQKIVALKRVRFDNFDAESVKFMAREILVLRRLDHPNIIKLEGLITSQTSRSLYLVFEYMEHDLTGLASSPSIKFSEPQVKCYMQQLLSGLNHCHSRGVLHRDIKGSNLLIDNNGTLKIADFGLANFIDPHHKVPLTSRVVTLWYRPPELLLGASNYGVAVDLWSTGCILGELYCGRPILPGKTEVEQLHRIFKLCGSPSEDYWRKLRSPHSTVFRPPHHYRRCIAETFKEYPSAVTRLIESLLALDPTLRGTAATALKSEFFSTEPLPCDPSSLPKYPPCKEIDTKLWEEATRQGADGRKEKKNGPRVRQEKEPQTFILSKDNEGPRISMQQGQRLPNSRSQNEFFNPHREPVSGHLVFPQKPSEDYKATVNYFSGPLYQRPMHSGPLVPGNGWEMAGKEGGEQPHVSNKVNLPKLSGVASRTSLSGDKKENHVSSRPQEAIQAQRSLESTNVGSDSRRRHDKKRHSHRIDHRQIENAKVSTQTQILEGHGPMGNNIGHLSGPLLVSSNNMDQMLKERDRKIQEYSRRARMYKSGEIARANQN* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01487 700 FunFam probable serine/threonine-protein kinase At1g54610 218 459 - -
Phac5g01487 700 MobiDBLite consensus disorder prediction 14 33 - -
Phac5g01487 700 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Phac5g01487 700 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Phac5g01487 700 CDD STKc_CDK9_like 135 419 - -
Phac5g01487 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Phac5g01487 700 MobiDBLite consensus disorder prediction 567 582 - -
Phac5g01487 700 MobiDBLite consensus disorder prediction 77 98 - -
Phac5g01487 700 MobiDBLite consensus disorder prediction 594 609 - -
Phac5g01487 700 MobiDBLite consensus disorder prediction 448 497 - -
Phac5g01487 700 MobiDBLite consensus disorder prediction 482 497 - -
Phac5g01487 700 MobiDBLite consensus disorder prediction 554 628 - -
Phac5g01487 700 SUPERFAMILY Protein kinase-like (PK-like) 128 427 IPR011009 -
Phac5g01487 700 ProSiteProfiles Protein kinase domain profile. 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01487 700 Gene3D Phosphorylase Kinase; domain 1 122 217 - -
Phac5g01487 700 SMART serkin_6 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01487 700 Gene3D Transferase(Phosphotransferase) domain 1 218 458 - -
Phac5g01487 700 MobiDBLite consensus disorder prediction 448 475 - -
Phac5g01487 700 MobiDBLite consensus disorder prediction 77 91 - -
Phac5g01487 700 Pfam Protein kinase domain 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01487 700 PANTHER CELL DIVISION PROTEIN KINASE 133 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01487 Phac-Chr5 34816531 34822350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01487 127 460 Core Cell Cycle Gene Families AT5G10270 48.571 3.13e-110 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phac5g01487 Pkinase 3.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01487 - K08819 gmx:100781209 1199.11