Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01483 ATGGATCACCAACAGGAAAATCAACCTTCTTCAACCAGAGTCGACAGAAAGATTGTAGAGAAAAACAGGCGAAACCATATGAAGAATCTTTATTCTGAACTCAACTCTCTTCTCCCTAGTTATAATCCCAAGCAAGTGGTGGCGCTGCCTGATCAAATAGATGAGGCAACGGAGTACATAAAAAGCCTAGAGGCAAAAGTTAGGATGGCGAAGGAGAAGAAAGAAAGGTTAATAATGGAGAGGAAGAGAACTCGAAGTGGTTTCTCTAGTGGTTTTGAAGCACGAGGAAACCTAAAACCGCCAAAAATGGAGATTCATGAAACGGGTTCTGTGCTTCGAGTCATTCTAACATGTGGGATTGATGACCATTTCGTTTTCTGTGAAATTATCAGAATATTGCATGAAGAGAATGTTGACGTAATCAATACCAGTTATTCAGTTGTTGGAGATTCGGTGATTCATGTTGTGCTCGGGGAGGTTGGGCAATCAATGTTCCAATCTGGAGCTAGCAAAGTGAGTGAAAAGCTGAAATGGTTCGTAAACGGATCTATCTGTGATGAAGAAATGGACCCTAATGTTATGGGATTCTGA 591 0.4112 MDHQQENQPSSTRVDRKIVEKNRRNHMKNLYSELNSLLPSYNPKQVVALPDQIDEATEYIKSLEAKVRMAKEKKERLIMERKRTRSGFSSGFEARGNLKPPKMEIHETGSVLRVILTCGIDDHFVFCEIIRILHEENVDVINTSYSVVGDSVIHVVLGEVGQSMFQSGASKVSEKLKWFVNGSICDEEMDPNVMGF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01483 196 MobiDBLite consensus disorder prediction 1 21 - -
Phac5g01483 196 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 11 63 IPR011598 GO:0046983
Phac5g01483 196 FunFam Transcription factor bHLH162 5 89 - -
Phac5g01483 196 Gene3D - 2 90 IPR036638 GO:0046983
Phac5g01483 196 SMART finulus 17 69 IPR011598 GO:0046983
Phac5g01483 196 Coils Coil 53 80 - -
Phac5g01483 196 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 177 - -
Phac5g01483 196 Pfam Helix-loop-helix DNA-binding domain 13 64 IPR011598 GO:0046983
Phac5g01483 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 82 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01483 Phac-Chr5 34690081 34690892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01483 1 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.566 9.33e-36 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac5g01483 HLH 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01483 - - gmx:100784042 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01483 5 34690081 34690892 Phac5g01483 5 34690081 34690892 ECH