Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01450 ATGCTGGCGGTGTCACCTTTGAGGAGTAGAAGAGATGAAGAGCAAGGGGAGATGGAGAGTTTCTCCATTGGAACTGATGACTTTGCTGACCTTTCAGAAGGGAACTTGCTTGAAAGCATCAACTTTGATGATCTCTTCATGGGAATCAACGATGACGAAGATGTCTTGCCAGATCTGGAGATGGACCCTGAATTGCTTGCTGAGTTCTCCCTCAGTGAGGAATCGGAGATAGTCTCATCAGTTTCAGTGGCAAATGACAAATCTGATGAAAGGAATGAGAATAATATAGTTTCTACAGAGACACCAGATGAGGTTATAGCAGCCAATTTTTGTTCAGATTCTGGTTCCAATTCGGGGTCTAGTAGAGGGGAAGAGATAGGAAACAAAAGTGATGAATCAACTCATTCAGTGGGAGTGAATCCATCCCCTAAGGAAAGTGAGAAAGGAAGAAAATCATCAAGCCATTCAAGGAATAATCAGCAAGGGAAGAGAAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTTGTGCAAGCAGTGGAGCAGCTAGGAGTGGATAAGGCTGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGACTGTCTCACCCGCCATAACATTGCCAGCCACCTTCAAAAATATCGATCTCATAGGAAGCATTTGATAGCACGTGAAGCTGAAGCAGCAAGGTGGAGCCAAAGGAAACAATTCATGGGTGCAGCAAGTGTAGGTAGAGGAGGAGGTAAGAGAGAGGTGAACCCTTGGCTTGCACCTACCATGGGTTTCCCTCCCATGACACCAATGCACCATTTTAGACCTTTACATGTATGGGGGCATCACACCATGGACCAGTCCTTCATGCACATGTGGCCTAAACATCTCCCATATTCACCGTCCCGGCCGGCTTGGCCACAGCGAACAGTTCCATCTCCGCCGCCTCCAGATCCTCTTTATTGGCACCAACATCAACGGGCTCCAAACACACCAACCCCTGGAACACCGTGTTTTCCACAGCCTCTGACAACCACGAGATTTGGTTCTCAAACTGTTCCGGGCATCCCACCACACCATGCAATGTTCCAAATGGTAGATCCAGGCATTGGCCTCCCAGCCACCCAACCACCACCTCGACCCCTCCTCGATTTTCATCCGTCAAAGGAGAGCATAGATGCTGCTATTAGTGATGTTTTATCAAAACCATGGTTGCCACTACCCCTTGGCCTTAAAGCTCCAGCACTTGATGGTGTAATGGGTGAATTACAAAGACAAGGGATTCCCAAAATCCCTCCCTCTTGTGCTTGA 1302 0.477 MLAVSPLRSRRDEEQGEMESFSIGTDDFADLSEGNLLESINFDDLFMGINDDEDVLPDLEMDPELLAEFSLSEESEIVSSVSVANDKSDERNENNIVSTETPDEVIAANFCSDSGSNSGSSRGEEIGNKSDESTHSVGVNPSPKESEKGRKSSSHSRNNQQGKRKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLIAREAEAARWSQRKQFMGAASVGRGGGKREVNPWLAPTMGFPPMTPMHHFRPLHVWGHHTMDQSFMHMWPKHLPYSPSRPAWPQRTVPSPPPPDPLYWHQHQRAPNTPTPGTPCFPQPLTTTRFGSQTVPGIPPHHAMFQMVDPGIGLPATQPPPRPLLDFHPSKESIDAAISDVLSKPWLPLPLGLKAPALDGVMGELQRQGIPKIPPSCA* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01450 433 MobiDBLite consensus disorder prediction 144 169 - -
Phac5g01450 433 Pfam Myb-like DNA-binding domain 166 215 IPR001005 -
Phac5g01450 433 MobiDBLite consensus disorder prediction 1 27 - -
Phac5g01450 433 SUPERFAMILY Homeodomain-like 162 220 IPR009057 -
Phac5g01450 433 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 432 IPR044825 GO:0003700|GO:0045893
Phac5g01450 433 NCBIfam myb-like DNA-binding domain, SHAQKYF class 163 217 IPR006447 GO:0003677
Phac5g01450 433 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 160 219 IPR017930 -
Phac5g01450 433 MobiDBLite consensus disorder prediction 77 169 - -
Phac5g01450 433 MobiDBLite consensus disorder prediction 110 124 - -
Phac5g01450 433 FunFam Two-component response regulator 159 222 - -
Phac5g01450 433 Gene3D - 160 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01450 Phac-Chr5 34417413 34421877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01450 27 384 G2-like Transcription Factor Family AT5G44190 41.176 2.23e-60 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac5g01450 Myb_DNA-binding 5.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01450 - - gmx:100775671 696.427