Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01449 ATGCTGGCGGTGTCACCTTTGAGGAGTAGAAGAGATGAAGAGCAAGGGGAGATGGAGAGTTTCTCCATTGGAACTGATGACTTTGCTGACCTTTCAGAAGGGAACTTGCTTGAAAGCATCAACTTTGATGATCTCTTCATGGGAATCAACGATGACGAAGATGTCTTGCCAGATCTGGAGATGGACCCTGAATTGCTTGCTGAGTTCTCCCTCAGTGAGGAATCGGAGATAGTCTCATCAGTTTCAGTGGCAAATGACAAATCTGATGAAAGGAATGAGAATAATATAGTTTCTACAGAGACACCAGATGAGGTTATAGCAGCCAATTTTTGTTCAGATTCTGGTTCCAATTCGGGGTCTAGTAGAGGGGAAGAGATAGGAAACAAAAGTGATGAATCAACTCATTCAGTGGGAGTGAATCCATCCCCTAAGGAAAGTGAGAAAGGAAGAAAATCATCAAGCCATTCAAGGAATAATCAGCAAGGGAAGAGAAAGGTAAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTTGTGCAAGCAGTGGAGCAGCTAGGAGTGGATAAGGCTGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGACTGTCTCACCCGCCATAACATTGCCAGCCACCTTCAAAAATATCGATCTCATAGGAAGCATTTGATAGCACGTGAAGCTGAAGCAGCAAGGTGGAGCCAAAGGAAACAATTCATGGGTGCAGCAAGTGTAGGTAGAGGAGGAGGTAAGAGAGAGGTGAACCCTTGGCTTGCACCTACCATGGGTTTCCCTCCCATGACACCAATGCACCATTTTAGACCTTTACATGTATGGGGGCATCACACCATGGACCAGTCCTTCATGCACATGTGGCCTAAACATCTCCCATATTCACCGTCCCGGCCGGCTTGGCCACAGCGAACAGTTCCATCTCCGCCGCCTCCAGATCCTCTTTATTGGCACCAACATCAACGGGTTAACTCTTTTGACTATGAAAATTCTTTCAAACTATTCAACTATTGA 1026 0.4581 MLAVSPLRSRRDEEQGEMESFSIGTDDFADLSEGNLLESINFDDLFMGINDDEDVLPDLEMDPELLAEFSLSEESEIVSSVSVANDKSDERNENNIVSTETPDEVIAANFCSDSGSNSGSSRGEEIGNKSDESTHSVGVNPSPKESEKGRKSSSHSRNNQQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLIAREAEAARWSQRKQFMGAASVGRGGGKREVNPWLAPTMGFPPMTPMHHFRPLHVWGHHTMDQSFMHMWPKHLPYSPSRPAWPQRTVPSPPPPDPLYWHQHQRVNSFDYENSFKLFNY* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01449 341 SUPERFAMILY Homeodomain-like 163 222 IPR009057 -
Phac5g01449 341 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 327 IPR044825 GO:0003700|GO:0045893
Phac5g01449 341 Pfam Myb-like DNA-binding domain 168 217 IPR001005 -
Phac5g01449 341 Gene3D - 162 223 - -
Phac5g01449 341 FunFam Two-component response regulator 160 224 - -
Phac5g01449 341 MobiDBLite consensus disorder prediction 1 27 - -
Phac5g01449 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 221 IPR017930 -
Phac5g01449 341 NCBIfam myb-like DNA-binding domain, SHAQKYF class 165 219 IPR006447 GO:0003677
Phac5g01449 341 MobiDBLite consensus disorder prediction 110 124 - -
Phac5g01449 341 MobiDBLite consensus disorder prediction 77 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01449 Phac-Chr5 34417413 34421877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01449 1 323 G2-like Transcription Factor Family AT5G44190 42.651 5.42e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac5g01449 Myb_DNA-binding 4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01449 - - gmx:100790591 506.138