Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01448 ATGCTGGCGGTGTCACCTTTGAGGAGTAGAAGAGATGAAGAGCAAGGGGAGATGGAGAGTTTCTCCATTGGAACTGATGACTTTGCTGACCTTTCAGAAGGGAACTTGCTTGAAAGCATCAACTTTGATGATCTCTTCATGGGAATCAACGATGACGAAGATGTCTTGCCAGATCTGGAGATGGACCCTGAATTGCTTGCTGAGTTCTCCCTCAGTGAGGAATCGGAGATAGTCTCATCAGTTTCAGTGGCAAATGACAAATCTGATGAAAGGAATGAGAATAATATAGTTTCTACAGAGACACCAGATGAGGTTATAGCAGCCAATTTTTGTTCAGATTCTGGTTCCAATTCGGGGTCTAGTAGAGGGGAAGAGATAGGAAACAAAAGTGATGAATCAACTCATTCAGTGGGAGTGAATCCATCCCCTAAGGAAAGTGAGAAAGGAAGAAAATCATCAAGCCATTCAAGGAATAATCAGCAAGGGAAGAGAAAGGTAAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTTGTGCAAGCAGTGGAGCAGCTAGGAGTGGATAAGGCTGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGACTGTCTCACCCGCCATAACATTGCCAGCCACCTTCAAAAATATCGATCTCATAGGAAGCATTTGATAGCACGTGAAGCTGAAGCAGCAAGGTGGAGCCAAAGGAAACAATTCATGGGTGCAGCAAGTGTAGGTAGAGGAGGAGGTAAGAGAGAGGTGAACCCTTGGCTTGCACCTACCATGGGTTTCCCTCCCATGACACCAATGCACCATTTTAGACCTTTACATGTATGGGGGCATCACACCATGGACCAGTCCTTCATGCACATGTGGCCTAAACATCTCCCATATTCACCGTCCCGGCCGGCTTGGCCACAGCGAACAGTTCCATCTCCGCCGCCTCCAGATCCTCTTTATTGGCACCAACATCAACGGGCTCCAAACACACCAACCCCTGGAACACCGTGTTTTCCACAGCCTCTGACAACCACGAGATTTGGTTCTCAAACTGTTCCGGGCATCCCACCACACCATGCAATGTTCCAAATGGTAGATCCAGGCATTGGCCTCCCAGCCACCCAACCACCACCTCGACCCCTCCTCGATTTTCATCCGTCAAAGGAGAGCATAGATGCTGCTATTAGTGATGTTTTATCAAAACCATGGTTGCCACTACCCCTTGGCCTTAAAGCTCCAGCACTTGATGGTGTAATGGGTGAATTACAAAGACAAGGGATTCCCAAAATCCCTCCCTCTTGTGCTTGA 1308 0.4763 MLAVSPLRSRRDEEQGEMESFSIGTDDFADLSEGNLLESINFDDLFMGINDDEDVLPDLEMDPELLAEFSLSEESEIVSSVSVANDKSDERNENNIVSTETPDEVIAANFCSDSGSNSGSSRGEEIGNKSDESTHSVGVNPSPKESEKGRKSSSHSRNNQQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLIAREAEAARWSQRKQFMGAASVGRGGGKREVNPWLAPTMGFPPMTPMHHFRPLHVWGHHTMDQSFMHMWPKHLPYSPSRPAWPQRTVPSPPPPDPLYWHQHQRAPNTPTPGTPCFPQPLTTTRFGSQTVPGIPPHHAMFQMVDPGIGLPATQPPPRPLLDFHPSKESIDAAISDVLSKPWLPLPLGLKAPALDGVMGELQRQGIPKIPPSCA* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01448 435 FunFam Two-component response regulator 160 224 - -
Phac5g01448 435 Gene3D - 162 223 - -
Phac5g01448 435 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 434 IPR044825 GO:0003700|GO:0045893
Phac5g01448 435 MobiDBLite consensus disorder prediction 1 27 - -
Phac5g01448 435 Pfam Myb-like DNA-binding domain 168 217 IPR001005 -
Phac5g01448 435 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 221 IPR017930 -
Phac5g01448 435 NCBIfam myb-like DNA-binding domain, SHAQKYF class 165 219 IPR006447 GO:0003677
Phac5g01448 435 SUPERFAMILY Homeodomain-like 163 222 IPR009057 -
Phac5g01448 435 MobiDBLite consensus disorder prediction 110 124 - -
Phac5g01448 435 MobiDBLite consensus disorder prediction 77 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01448 Phac-Chr5 34417413 34421877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01448 27 386 G2-like Transcription Factor Family AT5G44190 40.957 7.15e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac5g01448 Myb_DNA-binding 5.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01448 - - gmx:100775671 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01448 5 34417413 34421877 Phac5g01448 5 34417413 34421877 ECH