Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01446 ATGGGTGTTGATTACTACCAAATCCTTGAGGTCGATAGGAATGCTAAGGAAGAGGACCTGAAGAGATCGTACAAGAGACTGGCCATGAAATGCCACCCGGACAAAAATCCGACAAAGAAGGAAGCCGCTGAATCGATGTTTAAACAAGTATCTGAAGCGTACGAGGTGTTAAGTGATCCCCGCAAGAGGGCAATTTTTGATAAGTATGGTGAAAATGGTCTTAAAGGCCAGGTACCACCTGCTGATGCTGGTGCTTCGCATCGTGGTGTTTTTCATGGTGGTGCTTCTCGTGCTGGTGGAGGAGGAACCGCGTTCTATTCCAGCGGGGACTCTCCGGCCTCGTCTTGGTTCAATCCTCGGAGTGCTGATGATGTTTTTGCAGAGTTCTTTGGATGTTCGGACTCTGGTGGGGGCATGAGATCATCGACATTCTCTTTTAGTGAGGAGGCGGTTAGGACTTCCGGGGGCGGAGGAGGAGGAGGAGGAGAGACCCATGCGAGTCGTGGTGGTGGTCCCCTCAAAGCAGCTCCCATTGAGAAGAAGTTGCCCTGTACACTTGAGGAGTTATACAATGGGACCACCAAAAGGATGAAGATATCTCGGGACATTGTTGAGGCCTCTGGAAGACATATGCAGGTAGAAGAGATATTGACAATCAATGTGAAGGCTGGTTGGAAGAAGGGCACCAAGATCACCTTTATAGAGAAGGGAAATCAACAGCCAAATGTGACACCAGCTGATATTGTTTTCATCATAGATGAAAAAGTTCATGGAGTTTATTCTAGAGATGGAAATGACCTTGTGGTCACCCAGAAGATATCTCTTGTGGAAGCCTTGACAGGCTACACTGTGAACCTGGTCACACTTGATGGAAGAAACTTAACTGTGCCTATCAGCCGAATTATTCATCCTCAATATGAGGAGGTTGTTGAAAGAGAAGGGTTGCCTCTCCCAAGGGATCCAACAAAGAAGGGAAACTTGAGGATAAAGTTCAACATCAGATTCCCATCCAAGCTCACTCTTGACCAGAAGGTCGGAATGAAGAAACTTTTGGGTGCTTGA 1062 0.4727 MGVDYYQILEVDRNAKEEDLKRSYKRLAMKCHPDKNPTKKEAAESMFKQVSEAYEVLSDPRKRAIFDKYGENGLKGQVPPADAGASHRGVFHGGASRAGGGGTAFYSSGDSPASSWFNPRSADDVFAEFFGCSDSGGGMRSSTFSFSEEAVRTSGGGGGGGGETHASRGGGPLKAAPIEKKLPCTLEELYNGTTKRMKISRDIVEASGRHMQVEEILTINVKAGWKKGTKITFIEKGNQQPNVTPADIVFIIDEKVHGVYSRDGNDLVVTQKISLVEALTGYTVNLVTLDGRNLTVPISRIIHPQYEEVVEREGLPLPRDPTKKGNLRIKFNIRFPSKLTLDQKVGMKKLLGA* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01446 353 SUPERFAMILY Chaperone J-domain 3 94 IPR036869 -
Phac5g01446 353 SMART dnaj_3 3 62 IPR001623 -
Phac5g01446 353 Gene3D DnaJ domain 3 142 IPR036869 -
Phac5g01446 353 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Phac5g01446 353 FunFam Dnaj homolog subfamily b member 174 255 - -
Phac5g01446 353 CDD DnaJ 4 59 IPR001623 -
Phac5g01446 353 Gene3D - 177 256 - -
Phac5g01446 353 FunFam DnaJ subfamily B member 13 257 337 - -
Phac5g01446 353 CDD DnaJ_C 176 339 - -
Phac5g01446 353 Gene3D - 257 337 - -
Phac5g01446 353 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 351 - -
Phac5g01446 353 MobiDBLite consensus disorder prediction 150 174 - -
Phac5g01446 353 Pfam DnaJ C terminal domain 178 336 IPR002939 -
Phac5g01446 353 Pfam DnaJ domain 4 67 IPR001623 -
Phac5g01446 353 SUPERFAMILY HSP40/DnaJ peptide-binding domain 260 344 IPR008971 GO:0006457|GO:0051082
Phac5g01446 353 PRINTS DnaJ domain signature 62 81 IPR001623 -
Phac5g01446 353 PRINTS DnaJ domain signature 24 39 IPR001623 -
Phac5g01446 353 PRINTS DnaJ domain signature 6 24 IPR001623 -
Phac5g01446 353 PRINTS DnaJ domain signature 42 62 IPR001623 -
Phac5g01446 353 FunFam DnaJ subfamily B member 13 3 140 - -
Phac5g01446 353 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Phac5g01446 353 SUPERFAMILY HSP40/DnaJ peptide-binding domain 178 257 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01446 Phac-Chr5 34351722 34355422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01446 5 69 C2H2 Transcription Factor Family AT1G74250 34.783 8.17e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01446 K09510 - gmx:100778672 466.848