Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01436 ATGCTAGAAAAGATGGATGATGGAGAAATTTCAAATGCTTTTCCTCTTCAGAACCCATCAACTGCTGCATCTAACCAACCTCCTGCTTTGAAGAGGAAGAGAAACCTCCCTGGAAATCCAGATCCTGAAGCTGAGGTCATAGCCTTGTCTCCAAAGACTCTGATGGCAACAAACAGATTCGTGTGTGAAATTTGTCTCAAGGGTTTCCAAAGGGACCAAAACCTTCAACTCCATCGACGAGGGCACAACCTTCCTTGGAAGCTAAAGCAGAGAACAAGCAAAGAAGTAAGGAAGAGAGTTTATGTGTGTCCAGAGAAGACTTGTGTCCACCACCACCCTTCAAGGGCTCTGGGAGACTTAACTGGGATTAAGAAGCACTTCTGCAGAAAGCACGGTGAGAAGAAGTGGAAGTGCGAGAAGTGCTCAAAGCGTTATGCTGTGCAGTCAGACTGGAAAGCACACTCAAAAACATGTGGTACCCGAGAATACAAATGTGACTGTGGCACTATCTTTTCACGGAGGGATAGTTTCATCACTCACAGGGCTTTCTGCGATGCCTTAGCAGAAGAAACAGCAAGGGTAAACGCAGCATCAAACATTAGCAACTACAGCATCATGCAAAATCCCCTCGGTCCTAACATGACAACCCATTTTTCATCATTTTTCAAGCCAAATTCGTGCCCCGAGGAGCCAGTCCTAGGTAATCAAACATCTAAGGGGCTATCCCTTTGGATGACTCAAACATCTCAGGCTCATCAAACAATTGCTAACAACAATTTGCATGAATTTCAACAACTTGGGTCTGCTACAAGCCCAACCTCAATTTATTGTGGTGGTGGTGGTGGAAATCCACTTGCTCCTTGCTCAAATCCACCACCCTCTAATTACCAACTAAATTGGGTGTTTGGAAATAAACTCTCCTCCAATGGAAGCCAGGAGTTAACTAGCAGTGCTTCACTTCCACTAGTCGACAATATTGTTAAGGATAACCCCAACCTGCAACTCATAAGTGTTCCTTCCTTGTATAGTTCACAACACCAATCCCATCAAACAACCTCAGCAAACATGTCAGCCACAGCTTTATTGCAAAAAGCTGCGCAAATTGGGACAACTTCATCGGACCCATCATTATTCCTTGGGAGCATAGGTTTGAAATGCAACAGTCCAGGCCAAGATGGGAACAAGTTTTGTGGTATGTACGGTTCAAGTTCAGTACTCACAAGTCATGAGGGAGAGAATAATTATTCGGGTGATTTGTCACAAATGCCCCCAGCAAAACGACGGCACGTACAGAATGAAGAGAGTGCATGGGGACAAACTAGGGATTTTCTTGGAGTTGGTGGTGCCAACCATTTGCCACCCTTCATCAACCAACGGATGGATTTAATTTGA 1392 0.4476 MLEKMDDGEISNAFPLQNPSTAASNQPPALKRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASNISNYSIMQNPLGPNMTTHFSSFFKPNSCPEEPVLGNQTSKGLSLWMTQTSQAHQTIANNNLHEFQQLGSATSPTSIYCGGGGGNPLAPCSNPPPSNYQLNWVFGNKLSSNGSQELTSSASLPLVDNIVKDNPNLQLISVPSLYSSQHQSHQTTSANMSATALLQKAAQIGTTSSDPSLFLGSIGLKCNSPGQDGNKFCGMYGSSSVLTSHEGENNYSGDLSQMPPAKRRHVQNEESAWGQTRDFLGVGGANHLPPFINQRMDLI* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01436 463 FunFam protein indeterminate-domain 12-like 39 107 - -
Phac5g01436 463 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 21 447 IPR031140 -
Phac5g01436 463 Gene3D Classic Zinc Finger 129 196 - -
Phac5g01436 463 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Phac5g01436 463 MobiDBLite consensus disorder prediction 13 28 - -
Phac5g01436 463 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 82 IPR013087 -
Phac5g01436 463 FunFam protein indeterminate-domain 5, chloroplastic-like 114 193 - -
Phac5g01436 463 MobiDBLite consensus disorder prediction 1 44 - -
Phac5g01436 463 SUPERFAMILY beta-beta-alpha zinc fingers 131 180 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01436 Phac-Chr5 34155568 34159193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01436 27 447 IDZ Gene Family AT1G03840 53.319 1.39e-141 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac5g01436 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01436 K25870 - gmx:100778666 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01436 5 34155568 34159193 Phac5g01436 5 34155568 34159193 ECH