Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01421 ATGGCGCAATTACCTCCAAAGATCCCAAACTTGTCACCAAGTTGGCCAGACTTCTCTTCTCAACACCAGAAAATGCCATTGCCACCTCTTAACAACGGCACCACCACCAACAACAACACAGGCCATTATCAGCATCATCAAAACCCTTCTTGGGTGGACGAGTTCCTCGACTTCTCCTCCGCCCGGCGCGGCGCTCACAGGCGGTCGGTGAGCGATTCCATCACCTACTTGGACGCACCAATGAGGTGTGGTGAGAACAGCAATAATAACAATAATAATAGTAATGAGAATGAGTTTGACAAGTTTGATGATGAACAATTCATGTCCATGTTCACGGATGAAGTAGTGCTCTCTGGGGTCCCCTTGCCACCACCAACTACCTTGTCCTCCTCTAACCCTTCTAGCCCTTCCGACCAGAACTTCTTCCATGATGAGAAAGAGAGAAGCCGGAAGGAAATGAAGCTGCAGAAGGAGGACGAGGAGCACCGCCATCAATTGAAAAATGAAGCAGATGAGGTTGAAAGCCAATGCATACAGGAAATTATGCAGCCTCCAAATGACACCAATACTTCTTCTTCCAATGAGAGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTAGCTAATAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGAGAAGTGCAACTTCATTACAGGCTGAAGTTTCAGTGCTGTCTCCAAGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTAGACAACAGTGCTCTCAAGCAAAGAATCGCTGCCCTTGCTCAAGACAAGATATTTAAAGATGCTCATCAAGAGGCGCTGAAGAGGGAGATAGAGAGACTGAGGCAAGTTTATCACCAACAAAGCCTCAAGAAGATGGAAAATGCTGCAGGGTCACCATTACCATTACCAAATTCTATATGTGAAGTTCAAACAGAAAAGGAAGTACAACTTCTCAACGTTTGA 993 0.4532 MAQLPPKIPNLSPSWPDFSSQHQKMPLPPLNNGTTTNNNTGHYQHHQNPSWVDEFLDFSSARRGAHRRSVSDSITYLDAPMRCGENSNNNNNNSNENEFDKFDDEQFMSMFTDEVVLSGVPLPPPTTLSSSNPSSPSDQNFFHDEKERSRKEMKLQKEDEEHRHQLKNEADEVESQCIQEIMQPPNDTNTSSSNERITDPKRVKRILANRQSAQRSRVRKLQYISELERSATSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQSLKKMENAAGSPLPLPNSICEVQTEKEVQLLNV* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01421 330 MobiDBLite consensus disorder prediction 140 170 - -
Phac5g01421 330 MobiDBLite consensus disorder prediction 1 47 - -
Phac5g01421 330 PANTHER BASIC LEUCINE ZIPPER 34 1 307 - -
Phac5g01421 330 Pfam Basic region leucine zipper 198 246 IPR004827 GO:0003700|GO:0006355
Phac5g01421 330 FunFam Basic leucine zipper 61 200 273 - -
Phac5g01421 330 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Phac5g01421 330 Gene3D - 200 272 - -
Phac5g01421 330 CDD bZIP_plant_RF2 202 252 IPR044759 GO:0003700|GO:0006355
Phac5g01421 330 Coils Coil 280 300 - -
Phac5g01421 330 MobiDBLite consensus disorder prediction 118 170 - -
Phac5g01421 330 Coils Coil 143 176 - -
Phac5g01421 330 SMART brlzneu 197 261 IPR004827 GO:0003700|GO:0006355
Phac5g01421 330 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 251 IPR004827 GO:0003700|GO:0006355
Phac5g01421 330 MobiDBLite consensus disorder prediction 13 47 - -
Phac5g01421 330 SUPERFAMILY Leucine zipper domain 201 255 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01421 Phac-Chr5 33879646 33885161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01421 1 278 bZIP Transcription Factor Family AT3G58120 54.575 1.04e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac5g01421 bZIP_2 1.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01421 - - gmx:100815433 483.026