Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01411 ATGGGAATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGAGGGCACATTGTTCGGTCCACAGGTAGAAAAGATAGGCACAGTAAGGTTTACACTGCAAAGGGTCCTCGTGATCGCAGAGTTAGGCTCTCAGCGCACACAGCAATTCAGTTCTACGATGTTCAGGACCGTCTAGGGTATGACAGACCGAGCAAGGCCGTGGACTGGCTAATCAAGAAGGCCAAGAATGCCATTGACAAGCTCGCTGAGCTTCCTCCATGGCACCCTACTGCCAACGCTGCAGATGCAGAGAACAACCATAACCATGCAGGGTCTGGTGACATGGCCATTGCAGAACAATCAGAGTCTTCTGGTTACAATTTTCAGCTGCAAAGGCAATTAGGTGAGGACCATGATAACCACCATTCAGCTTTCATTCCTTCACCTATTGACACTGATGCAATAGCCTTTTTTCCCACAACCACTGCCCCCTCCTCCATCAATTTCCAAACCTACCCTCCTGACATAATCTCAAGAGCCAACAACTCCACTGAGGATCTTGGCCTTTCCCTGCACTCCTTCCAAGACCCGGGCCTGATTCATGGCCAGTCCCAAGCAGGTGCAAACCAAACACAAACACCTTCCAATCACCAAACCCTCTTTTCTGGCTCAAATCAAATGGGGTTTGAAGCCAATTACCCCAGGATTGTGACTTGGAACAATGATGCAGGCACAGATATGAACAGAACCGGGTTCATGGTCAACTCACCAGCTCTTCTAGGCCAAGGTGGTTCTGCTGCATATTCCCAGAGGGGGACCCTTCAGTCCAGTTTCTCACCATCACTTCGTCCTTGGAGTGACATTCCCATGGCTTCTTCCGCAGAACATCACAAGACACAACCAATTCAACAGGCTTCCATCTTTGGCAGCAGGTTTCTGTCTGATGCATTGCCAGGGTTCTGCATTCCTGCTAGAATTCAAGGCCAGGACGGGAGTCATGGTGTTAGTCCCGACAAGCCATCATCTTCTTCTCCTAATTCTCATCACCAAGCACAAACGTGA 1044 0.4962 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLAELPPWHPTANAADAENNHNHAGSGDMAIAEQSESSGYNFQLQRQLGEDHDNHHSAFIPSPIDTDAIAFFPTTTAPSSINFQTYPPDIISRANNSTEDLGLSLHSFQDPGLIHGQSQAGANQTQTPSNHQTLFSGSNQMGFEANYPRIVTWNNDAGTDMNRTGFMVNSPALLGQGGSAAYSQRGTLQSSFSPSLRPWSDIPMASSAEHHKTQPIQQASIFGSRFLSDALPGFCIPARIQGQDGSHGVSPDKPSSSSPNSHHQAQT* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01411 347 Pfam TCP family transcription factor 23 117 IPR017887 -
Phac5g01411 347 MobiDBLite consensus disorder prediction 328 347 - -
Phac5g01411 347 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Phac5g01411 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 306 IPR005333 GO:0003700
Phac5g01411 347 MobiDBLite consensus disorder prediction 318 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01411 Phac-Chr5 33724662 33727831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01411 8 343 TCP Transcription Factor Family AT3G15030 44.169 3.17e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac5g01411 TCP 4.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01411 - - pvu:PHAVU_005G097200g 662.914