Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01388 ATGGACTCCATCGCCGGAGCTCCGCCTCACACAGCAAACCCTCCACCGTCTCGGCCGTCGCCGTTCCCCGGCCGGGAAGACTGCTGGTCGGAGGAAGCCACGTTCACGCTCATCGAGGCGTGGGGAGAGCGCCACCTCGAACTCAACCGCGGGAACCTCCGCCAGAGGCACTGGCAAGAGGTCGCCGACACCGTCAACGCACGTCACGGCCACGCCGGCGCCAGGTCCCGCCGCACCGACGTGCAGTGCAAGAACCGCATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGATTCCGGCGATTCCGCCACCACCTGGCCGTTCTTTCGCCGCCTTGAGTTCCTCGTCGGCGACAATTTCCCGGCGAAGAAGCCCTCCCCGCCGGAGGCAACATCCGGCGATCGACGGAGCACTCCTCCGGCTAAGTCCCCGTCGTGGGCCCTCATTCCGGTCGGTCCTCGATCCCGCTCGCAGAAGCGGCCGACGCCGGCCGCGCCGGCGGCAGAGAGCGTCGCCGACTCGTACTTCCGGCGGAATTTCTCGGTTTTTGCTGCGGCGGCGGCCGCAGCCGCCGAGGCCGATAGCGATAATTCGAACGGTTCTAAATGGAGCAGTGGGAGTGAGAAGAGAGAGAAGAAGAAAAGAGGAAGGGATTGGGAATTTGGTTACAGAGAGGTCGCAGAAGCGTTGGAGAGGTTTGGGGAGATTTATGAGAGAGTTGAAGAAGCTAAACAGAGGCAAATGGTTGAGTTGGAGAAACAGAGAATGCAGTTTGCTAAGGATTTGGAAACCCAGAGAATGAAACTCTTCATGGAAACTCAGCTTCACTTGCAAAAAATGAATCGCTCCAACTCCAAACGTTCTTCTGCAACTGACAGTGTCTCATAA 903 0.5914 MDSIAGAPPHTANPPPSRPSPFPGREDCWSEEATFTLIEAWGERHLELNRGNLRQRHWQEVADTVNARHGHAGARSRRTDVQCKNRIDTLKKKYKIEKARVSDSGDSATTWPFFRRLEFLVGDNFPAKKPSPPEATSGDRRSTPPAKSPSWALIPVGPRSRSQKRPTPAAPAAESVADSYFRRNFSVFAAAAAAAAEADSDNSNGSKWSSGSEKREKKKRGRDWEFGYREVAEALERFGEIYERVEEAKQRQMVELEKQRMQFAKDLETQRMKLFMETQLHLQKMNRSNSKRSSATDSVS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01388 300 FunFam trihelix transcription factor ASIL2 29 96 - -
Phac5g01388 300 MobiDBLite consensus disorder prediction 1 26 - -
Phac5g01388 300 MobiDBLite consensus disorder prediction 196 221 - -
Phac5g01388 300 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 289 IPR044823 -
Phac5g01388 300 SMART 118neu2 36 125 IPR006578 -
Phac5g01388 300 MobiDBLite consensus disorder prediction 124 171 - -
Phac5g01388 300 Pfam Myb/SANT-like DNA-binding domain 26 119 IPR044822 -
Phac5g01388 300 Gene3D - 29 96 - -
Phac5g01388 300 Coils Coil 231 262 - -
Phac5g01388 300 MobiDBLite consensus disorder prediction 281 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01388 Phac-Chr5 33245262 33249352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01388 180 296 Trihelix Transcription Factor Family AT3G14180 38.655 7.27e-16 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac5g01388 Myb_DNA-bind_4 2.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01388 - - gmx:100784918 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01388 5 33245262 33249352 Phac5g01388 5 33245262 33249352 ECH