LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g01387	ATGGAGGAGACACGAGAAGATGCAGGGCCGACAGAGCAAGGGCCATCTAATGTGTCGTGGTGGCCTTCAGATTTTGTTGAAAAATTTGGATCTGTTTCTTTGGATTCTCATGATGAGACACTAAGTAATAAAGAATCTCCTCGACATTTTGTCAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACTCTCTGGTGCACTGGAATGCTTTCAGAACCCATACCAAATGGTTTTTACTCGGTTATTCCCGAAAAAAGACTCAAGGAACTTTTTGATAATATTCCTACCTTGGACGAGCTTCATGCTTTGAGTGGAGAGGGTTTTAAGGCCGATATCATTCTTGTGGATTCAGAGAAAGATAAAAAGTTATCCATGTTAAAGCAATTGATTGTGGCACTAGTTAAAGGATTAAACTCAAATCCGGCTGCCATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGTCCCAATGCGGAAAGTCCAGCAAAAGCTGCTCTAGATGAAACCTCTAACATGTTTGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTTGGTCTTGAAAGTAGGCTCATGGTGGGAATGCCAAATGATGGAGTTACTGAATGTCAAGACTCGTACAAGCATATGTCTCTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGTTTTCCAGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCACATTTCTGGTGCAGGAGAGAGTGATTCAGCTGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGCCCTTTGTTTGGGGTTTCAGAGAGTGTTGAGAAGGAGGAAAGCCTCCAATTCCATAGAAAATTTGAACCATCTTCAAATGCATTGGGCCTTTCCTTGAGAAATGTGATGTTAAAATCAAATAACAGTTTGAGCTTGTCTTATAGTGAACCCAACATTGGCACTACATTAGGTCGGCGTAGTCGGAGAAAGATCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCAATTCGAGCACGTGGACGGTCCATGCTTAGTGGTGATAGGAGTGGTGATAGGACAGCATTTAGAGATTTTACTGATGATCAAGCTACATCAAGATCTAGCTATAGGTCAGATGGCGCATCCTCGTCAGAAGCCCGTAGGATAAGAAGAAGAAGCATCAGCATTACACCTGAGATTGGAGATGATATCGTAAGGGCTGTGCGGGCTATGAATGAAACTCTGAAGCAAAATCGTCTCTTGAGAGAACGAGGGGATGATAACTCTCCAAACAATAATAGTAGTGATGCAAACCTTCAGAAAAATGTGTCAAATTTCCATCATGATGCTCTATATTCTTGTCAGCATGACCAAGGAAATTCACAGAAGGCAATGTCGTTACCATCTTCACCACATGATTATAGAGGTCATGCTTCGGATAGAAGTGGACCGTCTAGATACGGAGTGAATGATGAAATGGAGTCAACTTGGAATAAAGTACTGGAATCTCCAATGTTCAATAATAAACCTTTGTTACCGTATGAAAAATGGAATATTGACTTCTCTGAATTGACTGTTGGAACTCGAGTAGGGATTGGTTTCTTTGGAGAGGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATTAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGTAATGAGATATCTATTCTGAGCCGACTCCGACATCCTAATGTTATCTTGTTTCTCGGTGCATGCACAAAGCCTCCACGCTTGTCAATGGTTACAGAATATATGGAATTGGGATCGTTGTATTACTTGATACATTTAAGTGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGACTAAGGATGTTACGTGACATATGCAAGGGTTTGATGTGCATACATCGAATGAAGATTGTTCACCGTGATCTGAAAAGCGCAAATTGTCTGGTGAATAAGCATTGGACTGTGAAAATATGTGATTTTGGGCTTTCAAGATTAATGACAGAGTCTCCCATGAGAGATTCTTCCTCGGCTGGAACTCCAGAATGGATGGCTCCTGAGCTCATTCGAAACGAACCATTCACAGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATGTGGGAACTCTGCACCTTGAGCAGACCATGGGAAGGAGTACCACCTGAGAGGGTGGTTTATTCCGTTGCAAATGAGGCTTCCAGATTGGAAATACCAGAAGGCCCTCTAGGAAGGCTGATTTCAGAATGTTGGGCAGAATCTCTTGAGAGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTGATGGACATCGAGTACTCCTTGTGCTGA	2418	0.4136	MEETREDAGPTEQGPSNVSWWPSDFVEKFGSVSLDSHDETLSNKESPRHFVKDVLSSQKASQTLWCTGMLSEPIPNGFYSVIPEKRLKELFDNIPTLDELHALSGEGFKADIILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNAESPAKAALDETSNMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMVGMPNDGVTECQDSYKHMSLIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISGAGESDSAENDSCDSPLEPNSPLFGVSESVEKEESLQFHRKFEPSSNALGLSLRNVMLKSNNSLSLSYSEPNIGTTLGRRSRRKIIAEQRTASSSPEHPSIRARGRSMLSGDRSGDRTAFRDFTDDQATSRSSYRSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSPNNNSSDANLQKNVSNFHHDALYSCQHDQGNSQKAMSLPSSPHDYRGHASDRSGPSRYGVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMELGSLYYLIHLSGQKKKLNWRRRLRMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRLMTESPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYSVANEASRLEIPEGPLGRLISECWAESLERPSCEEILSRLMDIEYSLC*	806

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g01387	805	Gene3D	Transferase(Phosphotransferase) domain 1	628	804	-	-
	Phac5g01387	805	MobiDBLite	consensus disorder prediction	1	20	-	-
	Phac5g01387	805	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	668	680	IPR008271	GO:0004672\|GO:0006468
	Phac5g01387	805	Pfam	Protein tyrosine and serine/threonine kinase	550	797	IPR001245	GO:0004672\|GO:0006468
	Phac5g01387	805	MobiDBLite	consensus disorder prediction	354	415	-	-
	Phac5g01387	805	FunFam	Serine/threonine-protein kinase isoform 1	539	627	-	-
	Phac5g01387	805	Gene3D	Phosphorylase Kinase; domain 1	542	627	-	-
	Phac5g01387	805	MobiDBLite	consensus disorder prediction	482	514	-	-
	Phac5g01387	805	MobiDBLite	consensus disorder prediction	441	465	-	-
	Phac5g01387	805	SUPERFAMILY	Protein kinase-like (PK-like)	523	797	IPR011009	-
	Phac5g01387	805	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	330	800	-	-
	Phac5g01387	805	Pfam	Ethylene-responsive protein kinase Le-CTR1	57	253	-	-
	Phac5g01387	805	MobiDBLite	consensus disorder prediction	392	407	-	-
	Phac5g01387	805	ProSitePatterns	Protein kinases ATP-binding region signature.	555	576	IPR017441	GO:0005524
	Phac5g01387	805	MobiDBLite	consensus disorder prediction	376	391	-	-
	Phac5g01387	805	MobiDBLite	consensus disorder prediction	271	291	-	-
	Phac5g01387	805	CDD	STKc_MAP3K-like	555	797	-	-
	Phac5g01387	805	ProSiteProfiles	Protein kinase domain profile.	549	804	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g01387	805	SMART	serkin_6	549	798	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac5g01387	Phac-Chr5	33209645	33234271	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g01387	1	805	MAP Kinase Kinase Kinase	AT3G58640	69.759	0.0	1158

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_CTR1-DRK-1	Phac5g01387		PK_Tyr_Ser-Thr	2.1e-60	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g01387	-		-	gmx:100803469	1438.32